RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CA9Q16790 459 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 TSR1Q2NL82 804 aaKnown RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 PARP15Q460N3 678 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 NADK2Q4G0N4 442 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 CPZQ66K79 652 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 ASB18Q6ZVZ8 466 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 CYP4V2Q6ZWL3 525 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 TSPAN33Q86UF1 283 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 ATCAYQ86WG3 371 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 CCDC13Q8IYE1 715 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 NRSN1Q8IZ57 195 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 PGBD5Q8N414 524 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 NUS1Q96E22 293 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 CELF6Q96J87 481 aaKnown RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 TEFMQ96QE5 360 aaKnown RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 AGAP2Q99490 1192 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 NCAPGQ9BPX3 1015 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 C11orf70Q9BRQ4 267 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 SLC39A8Q9C0K1 460 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 MLXIPLQ9NP71 852 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 TMEM51Q9NW97 253 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 AKAP7Q9P0M2 348 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 RCOR3Q9P2K3 495 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 CROTQ9UKG9 612 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 FZD10Q9ULW2 581 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 KCTD3Q9Y597 815 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 RPS6KL1Q9Y6S9 549 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 TRBV23OR9-2A0A075B6M9 112 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 GOLGA6L3A6NEY3 463 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 NPIPB15A6NHN6 443 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-204ENST00000563739 F8VZ95 297 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 LDLRP01130 860 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 TEAD1P28347 426 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 SDC4P31431 198 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 ACTR1BP42025 376 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 SNX16P57768 344 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 ACTR1AP61163 376 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 GPLD1P80108 840 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 TRAF2Q12933 501 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 MRPL49Q13405 166 aaKnown RBP10.31□□□□□ -0.76
SF3B3-204ENST00000563739 PYCR3Q53H96 274 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 SNAP47Q5SQN1 464 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 PPP1R15BQ5SWA1 713 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 KLHDC7AQ5VTJ3 777 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 WDR59Q6PJI9 974 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 WDR74Q6RFH5 385 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-204ENST00000563739 CEACAM20Q6UY09 585 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 TECPR1Q7Z6L1 1165 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 CCDC112Q8NEF3 446 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 SLC30A5Q8TAD4 765 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 CPT1CQ8TCG5 803 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 GANQ9H2C0 597 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 AKIRIN1Q9H9L7 192 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-204ENST00000563739 PRDM8Q9NQV8 689 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 GPATCH2LQ9NWQ4 482 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 OAS3Q9Y6K5 1087 aaKnown RBP10.31□□□□□ -0.76
SF3B3-204ENST00000563739 HIVEP1P15822 2718 aa10.31□□□□□ -0.76
SF3B3-204ENST00000563739 FER1L5A0AVI2 2057 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 EPHB6O15197 1021 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 RFPL1O75677 317 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 TIAF1O95411 115 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 UNGP13051 313 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-204ENST00000563739 SERPINA4P29622 427 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 PAPOLAP51003 745 aaKnown RBP10.3□□□□□ -0.76
SF3B3-204ENST00000563739 SH3BP2P78314 561 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 RAPGEF1Q13905 1077 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 ERV3-1Q14264 604 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 GRM3Q14832 879 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 ACOX1Q15067 660 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 FHL5Q5TD97 284 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 DOK6Q6PKX4 331 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 Q6ZVL8 140 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 ZNF354CQ86Y25 554 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 APLFQ8IW19 511 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-204ENST00000563739 ARFGAP1Q8N6T3 406 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 TEX19Q8NA77 164 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 KIAA1143Q96AT1 154 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-204ENST00000563739 COX14Q96I36 57 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 OR2M4Q96R27 311 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 MCCC1Q96RQ3 725 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-204ENST00000563739 WDR24Q96S15 920 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 PEBP4Q96S96 227 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 DPYSL5Q9BPU6 564 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 ATP13A3Q9H7F0 1226 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 PHPT1Q9NRX4 125 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-204ENST00000563739 TBC1D29Q9UFV1 150 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 RWDD2AQ9UIY3 292 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 ERRFI1Q9UJM3 462 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-204ENST00000563739 TMEM98Q9Y2Y6 226 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 POLEQ07864 2286 aa10.3□□□□□ -0.76
SF3B3-204ENST00000563739 TCP11X1B4DZS4 312 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 MKRN2OSH3BPM6 223 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 CREB3O43889 395 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 DNAJC6O75061 913 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 GADD45BO75293 160 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-204ENST00000563739 C9P02748 559 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 ANKRD34CP0C6C1 535 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 PRF1P14222 555 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 TNFRSF8P28908 595 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 VIPR1P32241 457 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms