RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 ANXA9O76027 345 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 TNFP01375 233 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 GPR1P46091 355 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 CDK3Q00526 305 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 C1orf61Q13536 156 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 SIRPB2Q5JXA9 342 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 FSTL5Q8N475 847 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-206ENST00000563672 CHCHD4Q8N4Q1 142 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 FAM181AQ8N9Y4 354 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 CCDC110Q8TBZ0 833 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 ANP32BQ92688 251 aaKnown RBP20.21■□□□□ 0.83
CMTM3-206ENST00000563672 PDXPQ96GD0 296 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 AGAP2Q99490 1192 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 FAM83DQ9H4H8 585 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 PKD2L2Q9NZM6 624 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 ANGPTL2Q9UKU9 493 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 SHOC2Q9UQ13 582 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 ZNF711Q9Y462 761 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 PCDHGA1Q9Y5H4 931 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 SPO11Q9Y5K1 396 aa20.21■□□□□ 0.83
CMTM3-206ENST00000563672 TDRD6O60522 2096 aaKnown RBP20.2■□□□□ 0.82
CMTM3-206ENST00000563672 GOLGA6CA6NDK9 693 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 GOLGA6BA6NDN3 693 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 YY2O15391 372 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 HYAL3O43820 417 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-206ENST00000563672 CEACAM5P06731 702 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 PYGLP06737 847 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 GOLGA6DP0CG33 693 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 CHRNA4P43681 627 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 ACADVLP49748 655 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 GEMP55040 296 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 SLC1A5Q15758 541 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 HS1BP3Q53T59 392 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 HENMT1Q5T8I9 393 aaKnown RBP20.2■□□□□ 0.82
CMTM3-206ENST00000563672 RD3Q7Z3Z2 195 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 REXO1L1PQ8IX06 675 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 KLHDC8BQ8IXV7 354 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 SDR16C5Q8N3Y7 309 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 FAM71DQ8N9W8 422 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 IPMKQ8NFU5 416 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 FRMD8Q9BZ67 464 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-206ENST00000563672 FRMD8P1Q9BZ68 369 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-206ENST00000563672 MRPL40Q9NQ50 206 aaKnown RBP20.2■□□□□ 0.82
CMTM3-206ENST00000563672 GOLGA6AQ9NYA3 693 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 SPEGQ15772 3267 aa20.2■□□□□ 0.82
CMTM3-206ENST00000563672 LY6G6EA0A0G2JKS1 128 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 FUCA1P04066 466 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 CELA2BP08218 269 aaPredicted RBP20.19■□□□□ 0.82
CMTM3-206ENST00000563672 CKMT1AP12532 417 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 HLA-DPA1P20036 260 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 ACP1P24666 158 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 PSMB4P28070 264 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 ADRA1AP35348 466 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 ELOCQ15369 112 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 DEFB133Q30KQ1 61 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 ZCCHC8Q6NZY4 707 aaKnown RBP20.19■□□□□ 0.82
CMTM3-206ENST00000563672 SLC25A41Q8N5S1 370 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 ATG4AQ8WYN0 398 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 APOLD1Q96LR9 279 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 TMEM121Q9BTD3 319 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 SCNM1Q9BWG6 230 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 GPR63Q9BZJ6 419 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 CDH19Q9H159 772 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 TRABDQ9H4I3 376 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 CNOT6Q9ULM6 557 aaKnown RBP20.19■□□□□ 0.82
CMTM3-206ENST00000563672 SLC17A4Q9Y2C5 497 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 AAR2Q9Y312 384 aaKnown RBP20.19■□□□□ 0.82
CMTM3-206ENST00000563672 U3KQA8 63 aa20.19■□□□□ 0.82
CMTM3-206ENST00000563672 CHD8Q9HCK8 2581 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 PRSS38A1L453 326 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 FAM221BA6H8Z2 402 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 AURKAO14965 403 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 LIASO43766 372 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 AGTP01019 485 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 FGF1P05230 155 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 ANXA6P08133 673 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 CTSEP14091 401 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 SPINK2P20155 84 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 TNNT3P45378 269 aaPredicted RBP20.18■□□□□ 0.82
CMTM3-206ENST00000563672 GDF10P55107 478 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 DCDC1P59894 354 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 ILKQ13418 452 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 PRPSAP1Q14558 356 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 OASLQ15646 514 aaKnown RBP20.18■□□□□ 0.82
CMTM3-206ENST00000563672 LVRNQ6Q4G3 990 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 RANBP10Q6VN20 620 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 GPR26Q8NDV2 337 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 RTP4Q96DX8 246 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 COX14Q96I36 57 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 HIC2Q96JB3 615 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 PPP1R2P1Q96PQ5 205 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 FSD1LQ9BXM9 530 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 CYP4F12Q9HCS2 524 aa20.18■□□□□ 0.82
CMTM3-206ENST00000563672 NFKBIL1Q9UBC1 381 aaPredicted RBP20.18■□□□□ 0.82
CMTM3-206ENST00000563672 RFPL3O75679 317 aa20.17■□□□□ 0.82
CMTM3-206ENST00000563672 CDK4P11802 303 aa20.17■□□□□ 0.82
CMTM3-206ENST00000563672 STIP1P31948 543 aaKnown RBP20.17■□□□□ 0.82
CMTM3-206ENST00000563672 SIX1Q15475 284 aaPredicted RBP20.17■□□□□ 0.82
CMTM3-206ENST00000563672 PARP6Q2NL67 630 aa20.17■□□□□ 0.82
CMTM3-206ENST00000563672 C6orf132Q5T0Z8 1188 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms