RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 CFC1BP0CG36 223 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 CFC1P0CG37 223 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 SRCP12931 536 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 EPHA8P29322 1005 aaPredicted RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 CDAP32320 146 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 RARSP54136 660 aaKnown RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 SEC61BP60468 96 aaKnown RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 OASLQ15646 514 aaKnown RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 CTF1Q16619 201 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 KRT24Q2M2I5 525 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 SETMARQ53H47 684 aaPredicted RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 GGNBP1Q5YKI7 109 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 FBXO46Q6PJ61 603 aaPredicted RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 TAOK1Q7L7X3 1001 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 GSTA5Q7RTV2 222 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 SMIM29Q86T20 159 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 IL17RCQ8NAC3 791 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 MAGEC3Q8TD91 643 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 LRRC8CQ8TDW0 803 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 SECTM1Q8WVN6 248 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 C3orf30Q96M34 536 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 NR1H4Q96RI1 486 aaPredicted RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 HAUS8Q9BT25 410 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 IFIH1Q9BYX4 1025 aaKnown RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 PDCL3Q9H2J4 239 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 RANBP17Q9H2T7 1088 aaKnown RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 ESRP2Q9H6T0 727 aaKnown RBP3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 PREBQ9HCU5 417 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 NOX4Q9NPH5 578 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 GPR108Q9NPR9 543 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 HAO1Q9UJM8 370 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 CAMK2AQ9UQM7 478 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 VDAC3Q9Y277 283 aa3.11□□□□□ -1.91
HDGFL3-202ENST00000562702 CHD1O14646 1710 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 URB2Q14146 1524 aaKnown RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 CCDC189A1A4V9 331 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 GOLGA6L9A6NEM1 432 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 EIF3CLB5ME19 914 aaKnown RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 AKR1B15C9JRZ8 316 aaPredicted RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 PRAC2D3DTV9 90 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 SOCS6O14544 535 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 XPNPEP2O43895 674 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 SEC14L2O76054 403 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 SEC31AO94979 1220 aaKnown RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 CLDN14O95500 239 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 PMS2P2O95744 297 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 CYC1P08574 325 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 ZNF883P0CG24 379 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 G6PDP11413 515 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 MAOAP21397 527 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 RRM1P23921 792 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 EIF2S3P41091 472 aaKnown RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 HARS2P49590 506 aaKnown RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 METAP2P50579 478 aaKnown RBP eCLIP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 CLCNKAP51800 687 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 SORDQ00796 357 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 NAE1Q13564 534 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 FGFBP1Q14512 234 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 DRAP1Q14919 205 aaPredicted RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 RBBP5Q15291 538 aaKnown RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 USP41Q3LFD5 358 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 C14orf177Q52M58 125 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 SLC45A4Q5BKX6 768 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 C6orf141Q5SZD1 244 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 ANKRD54Q6NXT1 300 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 WDR73Q6P4I2 378 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 KCTD18Q6PI47 426 aaPredicted RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 UNQ6126/PRO20091Q6UXV3 157 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 ATF7IPQ6VMQ6 1270 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 SLC36A4Q6YBV0 504 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 LYG1Q8N1E2 194 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 KCNH5Q8NCM2 988 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 METTL6Q8TCB7 284 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 NEK9Q8TD19 979 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 TANKQ92844 425 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 PABPC5Q96DU9 382 aaKnown RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 SLC41A2Q96JW4 573 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 PPM1MQ96MI6 270 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 CSF3RQ99062 836 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 FAM110AQ9BQ89 295 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 GLIS2Q9BZE0 524 aaPredicted RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 TKTL2Q9H0I9 626 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 NDST4Q9H3R1 872 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 UNC45AQ9H3U1 944 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 EVA1AQ9H8M9 152 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 HINT3Q9NQE9 182 aaKnown RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 ASAH2Q9NR71 780 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 SLC6A13Q9NSD5 602 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 TTC7AQ9ULT0 858 aaPredicted RBP3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 NAALADL1Q9UQQ1 740 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 KDM3AQ9Y4C1 1321 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 PRDM2Q13029 1718 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 PDS5BQ9NTI5 1447 aa3.1□□□□□ -1.91
HDGFL3-202ENST00000562702 CRYAAP02489 173 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 AFPP02771 609 aaKnown RBP3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 LINC00271P0C7V0 271 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 ELF1P32519 619 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 KRT9P35527 623 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 CDKN1AP38936 164 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 CASP6P55212 293 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms