RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NKX3-2P78367 333 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ECT2LQ008S8 904 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 FNBP1LQ5T0N5 605 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 PRMT9Q6P2P2 845 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 TMC5Q6UXY8 1006 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
TCF4-216ENST00000562680 PATL1Q86TB9 770 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 LONP2Q86WA8 852 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 CROCCP3Q8IVE0 287 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 SLC41A1Q8IVJ1 513 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 OR2AP1Q8NGE2 309 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ELMO1Q92556 727 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 LRIG1Q96JA1 1093 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 ZNF514Q96K75 400 aaPredicted RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 QRFPRQ96P65 431 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 FAM83DQ9H4H8 585 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 TAGLN3Q9UI15 199 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 RAP2CQ9Y3L5 183 aa7.55□□□□□ -1.2
TCF4-216ENST00000562680 MRPL42Q9Y6G3 142 aaKnown RBP7.55□□□□□ -1.2
TCF4-216ENST00000562680 DCLK1O15075 740 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 AVILO75366 819 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ADH5P11766 374 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ERVK-21P61565 698 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 PFKPQ01813 784 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 OVGP1Q12889 678 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 PTK2BQ14289 1009 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 CAPRIN1Q14444 709 aaKnown RBP7.54□□□□□ -1.2
TCF4-216ENST00000562680 EIF4HQ15056 248 aaKnown RBP7.54□□□□□ -1.2
TCF4-216ENST00000562680 FXNQ16595 210 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 PKDCCQ504Y2 493 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 RAB41Q5JT25 222 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 SYTL1Q8IYJ3 562 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 SLC26A7Q8TE54 656 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ASZ1Q8WWH4 475 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 TLCD1Q96CP7 247 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 TMEM209Q96SK2 561 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 CCDC28BQ9BUN5 200 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 POMKQ9H5K3 350 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 GKN1Q9NS71 199 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ARL15Q9NXU5 204 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 COCHO43405 550 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 SOCS5O75159 536 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 HLA-DQB2P05538 268 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 RPA3P35244 121 aaPredicted RBP7.54□□□□□ -1.2
TCF4-216ENST00000562680 C1QTNF8P60827 252 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 WASHC5Q12768 1159 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 DPYSQ14117 519 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 INPP5DQ92835 1189 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 TUBGCP5Q96RT8 1024 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 OSGEPL1Q9H4B0 414 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 DGKIO75912 1065 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ATP6V1G2O95670 118 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ESRRGP62508 458 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 HTRA3P83110 453 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 MBLAC2Q68D91 279 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 MILR1Q7Z6M3 343 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 DNAJC9Q8WXX5 260 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 SERAC1Q96JX3 654 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 PWWP2AQ96N64 755 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 RABGEF1Q9UJ41 708 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 LEFTY2O00292 366 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 CBFA2T3O75081 653 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 BEST1O76090 585 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 IPO13O94829 963 aaKnown RBP7.54□□□□□ -1.2
TCF4-216ENST00000562680 PIGNO95427 931 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ZNF30P17039 623 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 CTPS1P17812 591 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 PBLDP30039 288 aaPredicted RBP7.54□□□□□ -1.2
TCF4-216ENST00000562680 PLK1P53350 603 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 RABGGTBP53611 331 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 KPNB1Q14974 876 aaKnown RBP7.54□□□□□ -1.2
TCF4-216ENST00000562680 ATP6AP1LQ52LC2 224 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 KIAA1324Q6UXG2 1013 aaKnown RBP7.54□□□□□ -1.2
TCF4-216ENST00000562680 LPCAT2Q7L5N7 544 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 SAMD14Q8IZD0 417 aaPredicted RBP7.54□□□□□ -1.2
TCF4-216ENST00000562680 SPATA22Q8NHS9 363 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 METTL6Q8TCB7 284 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ING5Q8WYH8 240 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 RTP4Q96DX8 246 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 MFSD1Q9H3U5 465 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 MID1IP1Q9NPA3 183 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 CHRAC1Q9NRG0 131 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 ABCB8Q9NUT2 735 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 PLLPQ9Y342 182 aa7.54□□□□□ -1.2
TCF4-216ENST00000562680 RGS14O43566 566 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 CCNT2O60583 730 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 CTBP1Q13363 440 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NR6A1Q15406 480 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 DLG2Q15700 870 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 TJAP1Q5JTD0 557 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 HECTD2Q5U5R9 776 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 PTGR2Q8N8N7 351 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 IRF7Q92985 503 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 PHF21BQ96EK2 531 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 PSKH2Q96QS6 385 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 MCCC1Q96RQ3 725 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 SUV39H2Q9H5I1 410 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 PAK6Q9NQU5 681 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms