RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 IMPDH1P20839 514 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 HSPA13P48723 471 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 STX1BP61266 288 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 CD300CQ08708 224 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 LRP8Q14114 963 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 ZBTB46Q86UZ6 589 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 MIB1Q86YT6 1006 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 TICAM1Q8IUC6 712 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 OR9I1Q8NGQ6 314 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 HEPHQ9BQS7 1158 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 SLC25A23Q9BV35 468 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 SEMA6AQ9H2E6 1030 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 TRNAU1APQ9NX07 287 aaKnown RBP10.96□□□□□ -0.65
NEIL1-202ENST00000561643 GMIPQ9P107 970 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.65
NEIL1-202ENST00000561643 COL4A4P53420 1690 aaPredicted RBP10.96□□□□□ -0.65
NEIL1-202ENST00000561643 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.65
NEIL1-202ENST00000561643 TMX2-CTNND1H3BSU7 103 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 UBFD1O14562 309 aaKnown RBP10.96□□□□□ -0.66
NEIL1-202ENST00000561643 S1PR4O95977 384 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 MMP2P08253 660 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 OCM2P0CE71 109 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 OCMP0CE72 109 aaPredicted RBP10.96□□□□□ -0.66
NEIL1-202ENST00000561643 GRK4P32298 578 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 CDH13P55290 713 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 SLC14A2Q15849 920 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 ADRM1Q16186 407 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 TMEM207Q6UWW9 146 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 BLOC1S5Q8TDH9 187 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 SLC39A13Q96H72 371 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 VPS50Q96JG6 964 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 TBATAQ96M53 351 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 TRMOQ9BU70 441 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 PRDM5Q9NQX1 630 aaPredicted RBP10.96□□□□□ -0.66
NEIL1-202ENST00000561643 TMEM248Q9NWD8 314 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 SCML2Q9UQR0 700 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 NRP2O60462 931 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 SRP72O76094 671 aaKnown RBP10.96□□□□□ -0.66
NEIL1-202ENST00000561643 CSPG5O95196 566 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 FUCA1P04066 466 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 HMBSP08397 361 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 KCNC1P48547 511 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 GALNT1Q10472 559 aaPredicted RBP10.96□□□□□ -0.66
NEIL1-202ENST00000561643 DSC3Q14574 896 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 IHHQ14623 411 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 NRF1Q16656 503 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 KIF19Q2TAC6 998 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 ZNF678Q5SXM1 525 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 RAP1GAP2Q684P5 730 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 IL31Q6EBC2 164 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 OGFOD2Q6N063 350 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 FAM45BPQ6NSW5 357 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 BORAQ6PGQ7 559 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 CYP2R1Q6VVX0 501 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 ISCA2Q86U28 154 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 DCP1BQ8IZD4 617 aaKnown RBP10.96□□□□□ -0.66
NEIL1-202ENST00000561643 TMEM102Q8N9M5 508 aaPredicted RBP10.96□□□□□ -0.66
NEIL1-202ENST00000561643 FAM45AQ8TCE6 357 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 GPR152Q8TDT2 470 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 LPGAT1Q92604 370 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 C19orf60Q96EN9 201 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 FBRSL1Q9HCM7 1045 aaKnown RBP10.96□□□□□ -0.66
NEIL1-202ENST00000561643 CROTQ9UKG9 612 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 NOD1Q9Y239 953 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 FADS3Q9Y5Q0 445 aa10.96□□□□□ -0.66
NEIL1-202ENST00000561643 PRORSD1PA6NEY8 169 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 MROH6A6NGR9 719 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 OXSR1O95747 527 aaPredicted RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 TBX18O95935 607 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 CDK9P50750 372 aaKnown RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 C17orf99Q6UX52 265 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 CIR1Q86X95 450 aaPredicted RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 ALDH16A1Q8IZ83 802 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 ATP6V0D2Q8N8Y2 350 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 TSPAN14Q8NG11 270 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 SEMA3CQ99985 751 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 FBXO44Q9H4M3 255 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 FAM32AQ9Y421 112 aaKnown RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 K7EPI3 171 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 RAMP2O60895 175 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 GLP2RO95838 553 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 EIF2B2P49770 351 aaKnown RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 ZNF157P51786 506 aaPredicted RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 NME5P56597 212 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 PTPRCAPQ14761 206 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 POLD3Q15054 466 aaPredicted RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 FBXL22Q6P050 247 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 MSANTD2Q6P1R3 559 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 GALNT7Q86SF2 657 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 PTGR2Q8N8N7 351 aaPredicted RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 SH3RF2Q8TEC5 729 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 LRTOMTQ8WZ04 291 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 IGSF8Q969P0 613 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 PTERQ96BW5 349 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 RPRD1AQ96P16 312 aaPredicted RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 SLC39A3Q9BRY0 314 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
NEIL1-202ENST00000561643 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 PRG3Q9Y2Y8 225 aaPredicted RBP10.95□□□□□ -0.66
NEIL1-202ENST00000561643 SNX13Q9Y5W8 968 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms