RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GLRA2P23416 452 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ACAT1P24752 427 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 RPA1P27694 616 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 DUSP1P28562 367 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 CCND3P30281 292 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 PKLRP30613 574 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SERPINB6P35237 376 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 THBS2P35442 1172 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 GNL1P36915 607 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 CD96P40200 585 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 MDH1P40925 334 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 CETN2P41208 172 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 WNT5AP41221 380 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 EPS15P42566 896 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 CHRNA4P43681 627 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 NPBWR1P48145 328 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 DIO1P49895 249 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 NAGLUP54802 743 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SNRPNP63162 240 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 IRX4P78413 519 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 HSD11B2P80365 405 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 FAM189BP81408 668 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 COG7P83436 770 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SORDQ00796 357 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ECT2LQ008S8 904 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SP2Q02086 613 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 RUNX1T1Q06455 604 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ACSM1Q08AH1 577 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 DMWDQ09019 674 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ABRQ12979 859 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 MTAPQ13126 283 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SGCGQ13326 291 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 HLXQ14774 488 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 ZKSCAN8Q15776 578 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 SGCBQ16585 318 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LY6KQ17RY6 165 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 HFEQ30201 348 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 FAM214AQ32MH5 1076 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LEXMQ3ZCV2 418 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 CD300EQ496F6 205 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 AARDQ4LEZ3 155 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 KCNT1Q5JUK3 1230 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 C6orf136Q5SQH8 315 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ZNF648Q5T619 568 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 LRRC38Q5VT99 294 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ARHGEF16Q5VV41 709 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TCERG1LQ5VWI1 586 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 OR6B2Q6IFH4 312 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PMF1Q6P1K2 205 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 NEK5Q6P3R8 708 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SLC23A3Q6PIS1 610 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LCTLQ6UWM7 567 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 C17orf99Q6UX52 265 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 CCBE1Q6UXH8 406 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 C15orf39Q6ZRI6 1047 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SEPT14Q6ZU15 432 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 Q6ZUG5 572 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 C15orf52Q6ZUT6 534 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 MICALCLQ6ZW33 695 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LARP4Q71RC2 724 aaKnown RBP eCLIP2.05□□□□□ -2.08
RTF1-207ENST00000561076 INTS8Q75QN2 995 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 DOK3Q7L591 496 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LRRC70Q7Z2Q7 622 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 RNF144BQ7Z419 303 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PIGWQ7Z7B1 504 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ABI3BPQ7Z7G0 1075 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 B3GNT8Q7Z7M8 397 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ZNF605Q86T29 641 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TBC1D26Q86UD7 250 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 AACSQ86V21 672 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 EXOC3L1Q86VI1 746 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 RASAL3Q86YV0 1011 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 KLBQ86Z14 1044 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 EGFL6Q8IUX8 553 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 CDH26Q8IXH8 852 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 DDIASQ8IXT1 998 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 GSPT2Q8IYD1 628 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 FBXW8Q8N3Y1 598 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SFRP1Q8N474 314 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 METTL25Q8N6Q8 603 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.05□□□□□ -2.08
RTF1-207ENST00000561076 AGBL3Q8NEM8 1001 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 RNF139Q8WU17 664 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 HEXDCQ8WVB3 486 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ATL1Q8WXF7 558 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ATG4AQ8WYN0 398 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LPIN2Q92539 896 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 AKAP1Q92667 903 aaKnown RBP eCLIP2.05□□□□□ -2.08
RTF1-207ENST00000561076 LRRC59Q96AG4 307 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 R3HDM4Q96D70 268 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TRMT61AQ96FX7 289 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 CDKN2AIPNLQ96HQ2 116 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 COG3Q96JB2 828 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 VCPIP1Q96JH7 1222 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PGBD1Q96JS3 809 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ZNF570Q96NI8 536 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TEFMQ96QE5 360 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 PCYT2Q99447 389 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ZBTB18Q99592 522 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SLX1AQ9BQ83 275 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms