RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MBL2P11226 248 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 CKMT2P17540 419 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 TGM1P22735 817 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 EEF1DP29692 281 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 IDUAP35475 653 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 CAPGP40121 348 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 ATP6AP1Q15904 470 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 BRMS1LQ5PSV4 323 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 CCNYL2Q5T2Q4 361 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 TMEM135Q86UB9 458 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 SPATA2LQ8IUW3 424 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 PARP8Q8N3A8 854 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 CBR4Q8N4T8 237 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 PCSK9Q8NBP7 692 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 FAM156AQ8NDB6 213 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 ZUFSPQ96AP4 578 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 ZNF669Q96BR6 464 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 NPAS2Q99743 824 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 SNX15Q9NRS6 342 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 CD300AQ9UGN4 299 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 COPG1Q9Y678 874 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 THSD7BQ9C0I4 1608 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 GRID2O43424 1007 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 B4GALT3O60512 393 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 JCHAINP01591 159 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 GNAO1P09471 354 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 ELNP15502 786 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 CD1EP15812 388 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 MPSTP25325 297 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 PGFP49763 221 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 ZNF33AQ06730 810 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SMAD1Q15797 465 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 TMTC4Q5T4D3 741 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 DHFR2Q86XF0 187 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 DNAAF3Q8N9W5 541 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 ABHD11Q8NFV4 315 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 LILRB4Q8NHJ6 448 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 CALML6Q8TD86 181 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 VMP1Q96GC9 406 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SLC45A3Q96JT2 553 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 TSGA13Q96PP4 275 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 BEGAINQ9BUH8 593 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 GATA5Q9BWX5 397 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SMOC2Q9H3U7 446 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 AKIP1Q9NQ31 210 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 ABCC13Q9NSE7 274 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 CCM2LQ9NUG4 571 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 OXSMQ9NWU1 459 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SPO11Q9Y5K1 396 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 CENPFP49454 3210 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 ZCWPW2A0A1B0GU75 182 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 AQP12BA6NM10 295 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 TRPC5OSA6NMA1 111 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 E7ENX8 843 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 M0QX08 132 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 EIF3FO00303 357 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 TIPRLO75663 272 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 MYO1DO94832 1006 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 RASAL1O95294 804 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 KRT75O95678 551 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 NAT1P18440 290 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 RPL10P27635 214 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 GRIK1P39086 918 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 OPRL1P41146 370 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 NPY2RP49146 381 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 YWHAHQ04917 246 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SELENBP1Q13228 472 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 LRP8Q14114 963 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 INPP5AQ14642 412 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SPCS2Q15005 226 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 TIGD2Q4W5G0 525 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 C6orf10Q5SRN2 563 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 CERCAMQ5T4B2 595 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 ARTNQ5T4W7 220 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SLX4IPQ5VYV7 408 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 LIPMQ5VYY2 423 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 BTBD8Q5XKL5 378 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 FAM45BPQ6NSW5 357 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SPRED1Q7Z699 444 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 TFAP2DQ7Z6R9 452 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SCD5Q86SK9 330 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 CLEC14AQ86T13 490 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 RTN4RL1Q86UN2 441 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 AQP12AQ8IXF9 295 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 KLHDC8BQ8IXV7 354 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 FAM45AQ8TCE6 357 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 BHMTQ93088 406 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 BCL7BQ9BQE9 202 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 FTHL17Q9BXU8 183 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 SIK2Q9H0K1 926 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 PCDHAC1Q9H158 963 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 MYO16Q9Y6X6 1858 aa13.94□□□□□ -0.18
RABGGTA-220ENST00000560998 CACNG3O60359 315 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 PAGE1O75459 146 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 DNAJB5O75953 348 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 FCGR1AP12314 374 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 MATN1P21941 496 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 TCEA1P23193 301 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 HOXC13P31276 330 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms