RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ALOX15P16050 662 aaPredicted RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 ZNF37AP17032 561 aaPredicted RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 ATP5F1P24539 256 aaPredicted RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 SKIV2L2P42285 1042 aaKnown RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 PTGER3P43115 390 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 PTPN5P54829 565 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 DNAJB13P59910 316 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 PFKPQ01813 784 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ASPHQ12797 758 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ACCSLQ4AC99 568 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 NAPRTQ6XQN6 538 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 CERS6Q6ZMG9 384 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 TPRG1Q6ZUI0 275 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 Q6ZVU0 165 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 WDR75Q8IWA0 830 aaKnown RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 STK40Q8N2I9 435 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 SPATA6LQ8N4H0 392 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 PPP4R1Q8TF05 950 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ERP27Q96DN0 273 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 ASIC4Q96FT7 647 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 BIRC8Q96P09 236 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 MYLK2Q9H1R3 596 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 FAM96AQ9H5X1 160 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 STN1Q9H668 368 aaKnown RBP12.87□□□□□ -0.35
SNX1-211ENST00000560829 APPL1Q9UKG1 709 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 DNAJC16Q9Y2G8 782 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 COMMD10Q9Y6G5 202 aa12.87□□□□□ -0.35
SNX1-211ENST00000560829 GBF1Q92538 1859 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 A0A0U1RQS6 177 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 C1orf232A0A0U1RR37 186 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 GAPDHSO14556 408 aaPredicted RBP12.86□□□□□ -0.35
SNX1-211ENST00000560829 BMP1P13497 986 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 FCARP24071 287 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 CDKN1CP49918 316 aaPredicted RBP12.86□□□□□ -0.35
SNX1-211ENST00000560829 HSF5Q4G112 596 aaPredicted RBP12.86□□□□□ -0.35
SNX1-211ENST00000560829 ZRANB3Q5FWF4 1079 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 USP45Q70EL2 814 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 PIM3Q86V86 326 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 SKA1Q96BD8 255 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 CCDC126Q96EE4 140 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 FAM83CQ9BQN1 747 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 DRC3Q9H069 523 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 WWP1Q9H0M0 922 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 CCDC68Q9H2F9 335 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 SYTL2Q9HCH5 934 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 TAS2R13Q9NYV9 303 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 HAO1Q9UJM8 370 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 SLC30A1Q9Y6M5 507 aa12.86□□□□□ -0.35
SNX1-211ENST00000560829 DOCK6Q96HP0 2047 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 TRBV5-4A0A0C4DH59 114 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 UBA6A0AVT1 1052 aaPredicted RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 NPIPB15A6NHN6 443 aaPredicted RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 HEPACAM2A8MVW5 462 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 SRP72O76094 671 aaKnown RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 SNUPNO95149 360 aaKnown RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 CLDN7O95471 211 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 ESR1P03372 595 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 PKMP14618 531 aaKnown RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 SERPINB5P36952 375 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 NNMTP40261 264 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 PTPRNQ16849 979 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 GAB4Q2WGN9 574 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 SETMARQ53H47 684 aaPredicted RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 FAM91A1Q658Y4 838 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 SYCE2Q6PIF2 218 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 BRAT1Q6PJG6 821 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 CRTC1Q6UUV9 634 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 GDPD4Q6W3E5 623 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 ISCA2Q86U28 154 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 C12orf40Q86WS4 652 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 PAF1Q8N7H5 531 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 CHST14Q8NCH0 376 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNX1-211ENST00000560829 LRIG1Q96JA1 1093 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 HEPHQ9BQS7 1158 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 P2RY12Q9H244 342 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 ZDHHC6Q9H6R6 413 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 HEY2Q9UBP5 337 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 OAS3Q9Y6K5 1087 aaKnown RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 RANBP2P49792 3224 aaKnown RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 NUP210Q8TEM1 1887 aaPredicted RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 TSPAN11A1L157 253 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 AGAP14A8MT82 685 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 TULP3O75386 442 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 DNAJC8O75937 253 aaPredicted RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 RHOBTB1O94844 696 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 PRAMEF1O95521 474 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 CD1DP15813 335 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 BPIP17213 487 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 TFEBP19484 476 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 FMO4P31512 558 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 RECQLP46063 649 aaPredicted RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 AQP5P55064 265 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 POLR2LP62875 67 aaKnown RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 HYAL1Q12794 435 aa12.85□□□□□ -0.35
SNX1-211ENST00000560829 PDAP1Q13442 181 aaKnown RBP12.85□□□□□ -0.35
SNX1-211ENST00000560829 RCN2Q14257 317 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms