RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 HOXC4P09017 264 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 RBP3P10745 1247 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 STC1P52823 247 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 CDK3Q00526 305 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 E2F1Q01094 437 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 DPTQ07507 201 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 WASHC5Q12768 1159 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 XRCC4Q13426 336 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 C6orf132Q5T0Z8 1188 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 CCNI2Q6ZMN8 369 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 LYSMD3Q7Z3D4 306 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 CDKL3Q8IVW4 592 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 NRSN1Q8IZ57 195 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 ZNF567Q8N184 647 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 CBARPQ8N350 705 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 RNF10Q8N5U6 811 aaKnown RBP12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 FAM181AQ8N9Y4 354 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 FAM46DQ8NEK8 389 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 IFI44Q8TCB0 444 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 TEX101Q9BY14 249 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 TMEM168Q9H0V1 697 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 DPEP2Q9H4A9 486 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 SYNDIG1Q9H7V2 258 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 ZFYVE1Q9HBF4 777 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 USP29Q9HBJ7 922 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 GPR34Q9UPC5 381 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 CAPN6Q9Y6Q1 641 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 DGKBQ9Y6T7 804 aa12.93□□□□□ -0.34
CTDSPL2-209ENST00000560620 FAM221BA6H8Z2 402 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 KCNN4O15554 427 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 NDST3O95803 873 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 PYGLP06737 847 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 PROS1P07225 676 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 CCDC175P0C221 793 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 CD68P34810 354 aaPredicted RBP12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 PTPN7P35236 360 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 GNPDA1P46926 289 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 POLD2P49005 469 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 SPINT3P49223 89 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 ILF3Q12906 894 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 ALS2CLQ60I27 953 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 ITPRIPL1Q6GPH6 555 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 GUSBP11Q6P575 273 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 MARK2Q7KZI7 788 aaKnown RBP12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 ZNF765Q7L2R6 523 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 EFL1Q7Z2Z2 1120 aaKnown RBP12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 TRIM74Q86UV6 250 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 LRRC8AQ8IWT6 810 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 SLC35F3Q8IY50 421 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 SDR16C5Q8N3Y7 309 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 SLC25A41Q8N5S1 370 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 IPMKQ8NFU5 416 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 MAPK15Q8TD08 544 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 ZCCHC14Q8WYQ9 949 aaKnown RBP12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 GATA6Q92908 595 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 HIC2Q96JB3 615 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 TRIB3Q96RU7 358 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 LYSMD1Q96S90 227 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 HERPUD2Q9BSE4 406 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 FAM83DQ9H4H8 585 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 MAGEE1Q9HCI5 957 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 PADI4Q9UM07 663 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 TMEM98Q9Y2Y6 226 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 ZNF711Q9Y462 761 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 GPSM3Q9Y4H4 160 aa12.92□□□□□ -0.34
CTDSPL2-209ENST00000560620 GOLGA6L3A6NEY3 463 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 B4DGG1 531 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 CEACAM5P06731 702 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 GP1BAP07359 652 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 WNT3AP56704 352 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 INSM1Q01101 510 aaPredicted RBP12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 TARDBPQ13148 414 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 PRPSAP1Q14558 356 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 SLC14A2Q15849 920 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 SEL1L2Q5TEA6 688 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 LVRNQ6Q4G3 990 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 ADAMTSL4Q6UY14 1074 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 ARL10Q8N8L6 244 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 TTC13Q8NBP0 860 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 NAT6Q93015 286 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 ALS2CR12Q96Q35 445 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 FCRL5Q96RD9 977 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 AGAP2Q99490 1192 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 BOCQ9BWV1 1114 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 SPATA16Q9BXB7 569 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 SUFUQ9UMX1 484 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 CLCA2Q9UQC9 943 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 LRP4O75096 1905 aa12.91□□□□□ -0.34
CTDSPL2-209ENST00000560620 GOLGA4Q13439 2230 aaKnown RBP12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 LY6G6EA0A0G2JKS1 128 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 EME2A4GXA9 379 aaPredicted RBP12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 TMEM8BA6NDV4 472 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 DDX3YO15523 660 aaKnown RBP12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 OPA1O60313 960 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 ANXA9O76027 345 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 SOD1P00441 154 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms