RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CALR3Q96L12 384 aaKnown RBP14.04□□□□□ -0.16
TPM1-223ENST00000560445 RNF157Q96PX1 679 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 OR2M4Q96R27 311 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 LYSMD1Q96S90 227 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 CMKLR1Q99788 373 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 TMEM168Q9H0V1 697 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 RMI1Q9H9A7 625 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 NHEJ1Q9H9Q4 299 aaPredicted RBP14.04□□□□□ -0.16
TPM1-223ENST00000560445 PKD2L2Q9NZM6 624 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 VPS18Q9P253 973 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 LRIT1Q9P2V4 623 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 IGSF10Q6WRI0 2623 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 TTC24A2A3L6 582 aaPredicted RBP14.03□□□□□ -0.16
TPM1-223ENST00000560445 AKR1B15C9JRZ8 316 aaPredicted RBP14.03□□□□□ -0.16
TPM1-223ENST00000560445 KLK10O43240 276 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 SPOPO43791 374 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 TNFSF15O95150 251 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 CPNE6O95741 557 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 KRT1P04264 644 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 CEACAM5P06731 702 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 CTPS1P17812 591 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 GM2AP17900 193 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 ITPKBP27987 946 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 NR2C2P49116 596 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 STC1P52823 247 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 IFI35P80217 286 aaPredicted RBP14.03□□□□□ -0.16
TPM1-223ENST00000560445 DSC2Q02487 901 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 HLTFQ14527 1009 aaKnown RBP eCLIP14.03□□□□□ -0.16
TPM1-223ENST00000560445 TCEA2Q15560 299 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 TMEM164Q5U3C3 297 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 FOXR1Q6PIV2 292 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 SPRED1Q7Z699 444 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 TECPR1Q7Z6L1 1165 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 RNF214Q8ND24 703 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 CCDC112Q8NEF3 446 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 LPCAT1Q8NF37 534 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 ZDHHC1Q8WTX9 485 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 FERMT1Q9BQL6 677 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 MLPHQ9BV36 600 aaPredicted RBP14.03□□□□□ -0.16
TPM1-223ENST00000560445 LGR4Q9BXB1 951 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 B3GNT4Q9C0J1 378 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 MRPL40Q9NQ50 206 aaKnown RBP14.03□□□□□ -0.16
TPM1-223ENST00000560445 DTLQ9NZJ0 730 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 SEPT10Q9P0V9 454 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 TAAR2Q9P1P5 351 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 SUFUQ9UMX1 484 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
TPM1-223ENST00000560445 HEY1Q9Y5J3 304 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 NBEAQ8NFP9 2946 aa14.03□□□□□ -0.16
TPM1-223ENST00000560445 C1orf232A0A0U1RR37 186 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 CDRT15L2A8MXV6 281 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 GPR89AB7ZAQ6 455 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 NOBOXO60393 691 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 IPO7O95373 1038 aaKnown RBP14.02□□□□□ -0.17
TPM1-223ENST00000560445 GPR89BP0CG08 455 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 TAS2R40P59535 323 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 CXADRP78310 365 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 CCL7P80098 99 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 GBE1Q04446 702 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 AP1B1Q10567 949 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 TCEAL1Q15170 157 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 PDPK2PQ6A1A2 396 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 SLC9A4Q6AI14 798 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 TSPAN33Q86UF1 283 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 PIM3Q86V86 326 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 PQLC3Q8N755 202 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 WBP1Q96G27 269 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 PACSIN1Q9BY11 444 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 ABCG8Q9H221 673 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 CHKBQ9Y259 395 aa14.02□□□□□ -0.17
TPM1-223ENST00000560445 ERVH48-1M5A8F1 160 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 ATXN7O15265 892 aaPredicted RBP14.01□□□□□ -0.17
TPM1-223ENST00000560445 PSTPIP1O43586 416 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 ZNF189O75820 626 aaPredicted RBP14.01□□□□□ -0.17
TPM1-223ENST00000560445 JCHAINP01591 159 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 HLA-DQB2P05538 268 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 PDHA1P08559 390 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 CD82P27701 267 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 ACTR1BP42025 376 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 ACTR1AP61163 376 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 PTSQ03393 145 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 TRA2AQ13595 282 aaKnown RBP eCLIP14.01□□□□□ -0.17
TPM1-223ENST00000560445 SPA17Q15506 151 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 ATP13A4Q4VNC1 1196 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 SOWAHCQ53LP3 525 aaPredicted RBP14.01□□□□□ -0.17
TPM1-223ENST00000560445 DOK6Q6PKX4 331 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 ZNF438Q7Z4V0 828 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 NT5DC3Q86UY8 548 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 RFX6Q8HWS3 928 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 Q8N9G6 341 aaPredicted RBP14.01□□□□□ -0.17
TPM1-223ENST00000560445 ARRDC2Q8TBH0 407 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 RAPGEF5Q92565 580 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 SH3KBP1Q96B97 665 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 SCARF2Q96GP6 870 aaPredicted RBP14.01□□□□□ -0.17
TPM1-223ENST00000560445 ZMYND15Q9H091 742 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 FAM83DQ9H4H8 585 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 SUDS3Q9H7L9 328 aaPredicted RBP14.01□□□□□ -0.17
TPM1-223ENST00000560445 CAAP1Q9H8G2 361 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 SPTLC3Q9NUV7 552 aa14.01□□□□□ -0.17
TPM1-223ENST00000560445 ACSL6Q9UKU0 697 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms