RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NPWQ8N729 165 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 TTC9Q92623 222 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 FUBP1Q96AE4 644 aaKnown RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 THAP2Q9H0W7 228 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 LRRN3Q9H3W5 708 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 FGF22Q9HCT0 170 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 MRPL47Q9HD33 250 aaKnown RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 PCSK1NQ9UHG2 260 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 RABGEF1Q9UJ41 708 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 ATXN7L1Q9ULK2 861 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 ZNF462Q96JM2 2506 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 A0A1W2PQM1 296 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 CCDC151A5D8V7 595 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 PSMD11O00231 422 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 PRKCGP05129 697 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 MYCLP1P12525 358 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-214ENST00000560402 PLA2G2AP14555 144 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 H2AFXP16104 143 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-214ENST00000560402 SERPINB6P35237 376 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 ARL4AP40617 200 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 SCNN1BP51168 640 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 CLN3Q13286 438 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 DPYSQ14117 519 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 PPP2R5EQ16537 467 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 DPYSL2Q16555 572 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 C14orf28Q4W4Y0 310 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 GLE1Q53GS7 698 aaKnown RBP13.58□□□□□ -0.24
SMAD3-214ENST00000560402 OGFOD3Q6PK18 319 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 CCDC81Q6ZN84 652 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 TAF8Q7Z7C8 310 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 ARFGAP1Q8N6T3 406 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 LRRC57Q8N9N7 239 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 PLA2G15Q8NCC3 412 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 OR1E3Q8WZA6 343 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 NUS1Q96E22 293 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 ARFGAP3Q9NP61 516 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 B4GALT6Q9UBX8 382 aa13.58□□□□□ -0.24
SMAD3-214ENST00000560402 CNOT8Q9UFF9 292 aaKnown RBP13.58□□□□□ -0.24
SMAD3-214ENST00000560402 AHCTF1Q8WYP5 2266 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 PRSS38A1L453 326 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 TMEM202A6NGA9 273 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 PGRMC1O00264 195 aaKnown RBP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 ZW10O43264 779 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 HTRA2O43464 458 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 NUDT21O43809 227 aaKnown RBP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 NOBOXO60393 691 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 CPP00450 1065 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 CYP1A2P05177 515 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 JMJD7P0C870 316 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 TEAD1P28347 426 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 UGT1A5P35504 534 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 CCL7P80098 99 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 PEX6Q13608 980 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 HLTFQ14527 1009 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 NAA30Q147X3 362 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 CLPPQ16740 277 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 PNCKQ6P2M8 343 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 ARHGAP36Q6ZRI8 547 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 SPRED1Q7Z699 444 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 B3GNT8Q7Z7M8 397 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 CREG2Q8IUH2 290 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 MMGT1Q8N4V1 131 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 LRRN4CLQ8ND94 238 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 COQ10AQ96MF6 247 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 NUDCD1Q96RS6 583 aa13.57□□□□□ -0.24
SMAD3-214ENST00000560402 CCNL2Q96S94 520 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 PHPT1Q9NRX4 125 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 CWC15Q9P013 229 aaKnown RBP13.57□□□□□ -0.24
SMAD3-214ENST00000560402 ZFC3H1O60293 1989 aaKnown RBP13.56□□□□□ -0.24
SMAD3-214ENST00000560402 GOLGA6L10A0A0M3HER8 536 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 PMS2P1A4D2B8 440 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 B4DGG1 531 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 NVLO15381 856 aaKnown RBP13.56□□□□□ -0.24
SMAD3-214ENST00000560402 ATP8B1O43520 1251 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 RRP9O43818 475 aaKnown RBP13.56□□□□□ -0.24
SMAD3-214ENST00000560402 LIPCP11150 499 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-214ENST00000560402 GM2AP17900 193 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 CR2P20023 1033 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 VIPR1P32241 457 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 ACOX1Q15067 660 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 TCEA2Q15560 299 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 CNGA3Q16281 694 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 BOLA3Q53S33 107 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 FBXO38Q6PIJ6 1188 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 ATPAF2Q8N5M1 289 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 FAM46DQ8NEK8 389 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 SPATA4Q8NEY3 305 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 ZNF564Q8TBZ8 553 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-214ENST00000560402 NSMCE1Q8WV22 266 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 NUP85Q9BW27 656 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 GSDMCQ9BYG8 508 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 ACBD3Q9H3P7 528 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 CYP4F12Q9HCS2 524 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 LOXL2Q9Y4K0 774 aa13.56□□□□□ -0.24
SMAD3-214ENST00000560402 CCDC188H7C350 402 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 ZNF185O15231 689 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 SPOPO43791 374 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 CEP104O60308 925 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms