RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 C1QL3Q5VWW1 255 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 SRLQ86TD4 932 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 APLFQ8IW19 511 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 SRRM1Q8IYB3 904 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 PYROXD2Q8N2H3 581 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 SLC37A2Q8TED4 501 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 NUS1Q96E22 293 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 NSMCE3Q96MG7 304 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 CLSTN2Q9H4D0 955 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 ATP13A3Q9H7F0 1226 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 SIDT1Q9NXL6 827 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 DCHS2Q6V1P9 2916 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 J3KR12 359 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 KATNA1O75449 491 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 EML2O95834 649 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 LDLRP01130 860 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 CYP11B1P15538 503 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 SERPINA4P29622 427 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 SDC4P31431 198 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 CSNK1DP48730 415 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 HDAC4P56524 1084 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 BPIFB4P59827 614 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 PRR30Q53SZ7 412 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 CROCCQ5TZA2 2017 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 TAF3Q5VWG9 929 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 C6orf15Q6UXA7 325 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 STRADAQ7RTN6 431 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 UMODL1-AS1Q8N2C9 162 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 SFRP1Q8N474 314 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 TSEN2Q8NCE0 465 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 GALNT6Q8NCL4 622 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 JOSD2Q8TAC2 188 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 CPA5Q8WXQ8 436 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 NCSTNQ92542 709 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 CENPIQ92674 756 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 SCARF2Q96GP6 870 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 TCTN2Q96GX1 697 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 ULBP3Q9BZM4 244 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 ZNF768Q9H5H4 540 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 B4GALT6Q9UBX8 382 aa12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 ERRFI1Q9UJM3 462 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-213ENST00000560127 GTPBP10A4D1E9 387 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 C2CD4BA6NLJ0 364 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 WASH4PA8MWX3 477 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 TRAFD1O14545 582 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 PRAMEF11O60813 436 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 MAP3K6O95382 1288 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 NOP2P46087 812 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 NOMO3P69849 1222 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 PAK1Q13153 545 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 SEMA5AQ13591 1074 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 INPP5JQ15735 1006 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 CNGA3Q16281 694 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 DPY19L2P1Q6NXN4 242 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 DOK6Q6PKX4 331 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 CBARPQ8N350 705 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 PRR7Q8TB68 274 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 FAM172AQ8WUF8 416 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 NTAN1Q96AB6 310 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 DTD2Q96FN9 168 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 OR2M4Q96R27 311 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 TWSG1Q9GZX9 223 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 LRRC19Q9H756 370 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 DONSONQ9NYP3 566 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 RCOR3Q9P2K3 495 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 KLHL3Q9UH77 587 aa12.74□□□□□ -0.37
RABGGTA-213ENST00000560127 CCDC88CQ9P219 2028 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 PIPSLA2A3N6 862 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 INPP4BO15327 924 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 CREG1O75629 220 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 LSM8O95777 96 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 TEAD1P28347 426 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 ETV3P41162 512 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 PTPN9P43378 593 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 POLR2LP62875 67 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 BCL2L1Q07817 233 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 NFATC2Q13469 925 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 PYCR3Q53H96 274 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 NAA35Q5VZE5 725 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 DENND2CQ68D51 928 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 HSD11B1LQ7Z5J1 315 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 NOP9Q86U38 636 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 MSANTD4Q8NCY6 345 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 MLXIPLQ9NP71 852 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 HOOK1Q9UJC3 728 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 KCND3Q9UK17 655 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 TMEM98Q9Y2Y6 226 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 PCDHGA6Q9Y5G7 932 aa12.73□□□□□ -0.37
RABGGTA-213ENST00000560127 GOLGA6CA6NDK9 693 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 GOLGA6BA6NDN3 693 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 CREB3O43889 395 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 RECKO95980 971 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 SOD1P00441 154 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 GOLGA6DP0CG33 693 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 MAPK9P45984 424 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 PGDP52209 483 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms