RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 ETNK1Q9HBU6 452 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 PKD2L2Q9NZM6 624 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 HACD3Q9P035 362 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 PAK5Q9P286 719 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 CD84Q9UIB8 345 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 KLF15Q9UIH9 416 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 SAR1BQ9Y6B6 198 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 TPRP12270 2363 aaKnown RBP16.77■□□□□ 0.28
RPL28-209ENST00000560055 ERI2A8K979 691 aaKnown RBP16.77■□□□□ 0.28
RPL28-209ENST00000560055 PSMD3O43242 534 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 USP12O75317 370 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 SUN1O94901 812 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 ACTN2P35609 894 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 COILP38432 576 aaPredicted RBP16.77■□□□□ 0.28
RPL28-209ENST00000560055 ETF1P62495 437 aaKnown RBP16.77■□□□□ 0.28
RPL28-209ENST00000560055 IL9RQ01113 521 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 RAET1GQ6H3X3 334 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 ADAMTSL4Q6UY14 1074 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 HEATR4Q86WZ0 1026 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 TAB3Q8N5C8 712 aaPredicted RBP16.77■□□□□ 0.28
RPL28-209ENST00000560055 ATL2Q8NHH9 583 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 AGAP2Q99490 1192 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 RIOK2Q9BVS4 552 aaKnown RBP16.77■□□□□ 0.28
RPL28-209ENST00000560055 LGR4Q9BXB1 951 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 RAB6BQ9NRW1 208 aa16.77■□□□□ 0.28
RPL28-209ENST00000560055 FEZ2Q9UHY8 353 aaPredicted RBP16.77■□□□□ 0.28
RPL28-209ENST00000560055 PCNX2A6NKB5 2137 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 ARID1BQ8NFD5 2236 aaPredicted RBP16.76■□□□□ 0.27
RPL28-209ENST00000560055 PHF2O75151 1096 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 PYGLP06737 847 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 MYCLP1P12525 358 aaPredicted RBP16.76■□□□□ 0.27
RPL28-209ENST00000560055 BPIP17213 487 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 KCNA4P22459 653 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 FNTAP49354 379 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 CDK3Q00526 305 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 BNIP3Q12983 259 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 C4orf22Q6V702 233 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 NYAP1Q6ZVC0 841 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 GLT6D1Q7Z4J2 308 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 GPR26Q8NDV2 337 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 BLOC1S5Q8TDH9 187 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 CDH19Q9H159 772 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 FAM83DQ9H4H8 585 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 DNAJC28Q9NX36 388 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 IL17CQ9P0M4 197 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 NEU2Q9Y3R4 380 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 CHD8Q9HCK8 2581 aa16.76■□□□□ 0.27
RPL28-209ENST00000560055 SCN8AQ9UQD0 1980 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 GOLGA6L10A0A0M3HER8 536 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 TMEM202A6NGA9 273 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 CACNB4O00305 520 aaPredicted RBP16.75■□□□□ 0.27
RPL28-209ENST00000560055 FLRT2O43155 660 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 CBFA2T3O75081 653 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 PIAS2O75928 621 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 SLC4A1P02730 911 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 CSRP1P21291 193 aaKnown RBP16.75■□□□□ 0.27
RPL28-209ENST00000560055 HTR1BP28222 390 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 GPR1P46091 355 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 HNRNPKP61978 463 aaKnown RBP eCLIP16.75■□□□□ 0.276e-6■□□□□ 10
RPL28-209ENST00000560055 SUZ12Q15022 739 aaKnown RBP16.75■□□□□ 0.27
RPL28-209ENST00000560055 ALG11Q2TAA5 492 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 ZNF542PQ5EBM4 170 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 KCTD16Q68DU8 428 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 CCDC137Q6PK04 289 aaKnown RBP16.75■□□□□ 0.27
RPL28-209ENST00000560055 GSTA5Q7RTV2 222 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 GATAD2AQ86YP4 633 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 NAXDQ8IW45 347 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 SLC25A45Q8N413 288 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 BRSK1Q8TDC3 778 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 LRRC45Q96CN5 670 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 COX14Q96I36 57 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 TBATAQ96M53 351 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 WDR92Q96MX6 357 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 PLEKHG4BQ96PX9 1271 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 FGF22Q9HCT0 170 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 PHPT1Q9NRX4 125 aaPredicted RBP16.75■□□□□ 0.27
RPL28-209ENST00000560055 RAD18Q9NS91 495 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 CNOT6Q9ULM6 557 aaKnown RBP16.75■□□□□ 0.27
RPL28-209ENST00000560055 ACACBO00763 2458 aa16.75■□□□□ 0.27
RPL28-209ENST00000560055 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.74■□□□□ 0.27
RPL28-209ENST00000560055 FADS2P1A8MWK0 482 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 TNFRSF10CO14798 259 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 SH3BP5O60239 455 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 SDC3O75056 442 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 JUNDP17535 347 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 KELP23276 732 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 DGKAP23743 735 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 GRK6P43250 576 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 TAF1AQ15573 450 aaPredicted RBP16.74■□□□□ 0.27
RPL28-209ENST00000560055 KCTD19Q17RG1 926 aaPredicted RBP16.74■□□□□ 0.27
RPL28-209ENST00000560055 PDPK2PQ6A1A2 396 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 ENPP7Q6UWV6 458 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 SYT10Q6XYQ8 523 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 LINC00523Q86TU6 105 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 PHACTR4Q8IZ21 702 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 OR56A4Q8NGH8 313 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 BAHD1Q8TBE0 780 aaPredicted RBP16.74■□□□□ 0.27
RPL28-209ENST00000560055 DTX3LQ8TDB6 740 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 PDXPQ96GD0 296 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms