RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PIP5K1AQ99755 562 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PKP2Q99959 881 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 DPH2Q9BQC3 489 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 CCDC28BQ9BUN5 200 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 EFHD1Q9BUP0 239 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SGPP1Q9BX95 441 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 NDEL1Q9GZM8 345 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 QRSL1Q9H0R6 528 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 MTIF3Q9H2K0 278 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 TPK1Q9H3S4 243 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 EPB41L1Q9H4G0 881 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARMT1Q9H993 441 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 UNKLQ9H9P5 680 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PPANQ9NQ55 473 aaKnown RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 NECTIN3Q9NQS3 549 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 PRMT8Q9NR22 394 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 MAN2C1Q9NTJ4 1040 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RBAKQ9NYW8 714 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 SMARCAL1Q9NZC9 954 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 DTLQ9NZJ0 730 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 NCKAP1Q9Y2A7 1128 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 RNF215Q9Y6U7 377 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 MAU2Q9Y6X3 613 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 V9GYQ6 96 aa4.52□□□□□ -1.69
HMGB3P26-201ENST00000560051 STK36Q9NRP7 1315 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 A0A0B4J293 547 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 A0A1W2PN81 502 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 A0A1W2PQ09 198 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 HMX3A6NHT5 357 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 TSPAN4O14817 238 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 HGSO14964 777 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 NKRFO15226 690 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PPM1DO15297 605 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 KCNQ3O43525 872 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 TBX19O60806 448 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 DNAJB5O75953 348 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 CIAO1O76071 339 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PDE9AO76083 593 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 UBOX5O94941 541 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PCDH8O95206 1070 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PDE8BO95263 885 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 MT-ATP6P00846 226 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 CRYABP02511 175 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ACAA1P09110 424 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 CALCBP10092 127 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 GNSP15586 552 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PFKLP17858 780 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PTPN1P18031 435 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 CDH2P19022 906 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 MSR1P21757 451 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 AHCYP23526 432 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ADRA1DP25100 572 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PTPN3P26045 913 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 AOAHP28039 575 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 AVPR2P30518 371 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 HOXA9P31269 272 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 APOBEC3AP31941 199 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 BSGP35613 385 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 CHRNA7P36544 502 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 FEN1P39748 380 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 GABRB2P47870 512 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 SLC11A1P49279 550 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 LIG4P49917 911 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 HSD17B4P51659 736 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARSEP51690 589 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 AIF1P55008 147 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PSMD4P55036 377 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 RPS3AP61247 264 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 HTRA4P83105 476 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 SRSF3P84103 164 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 TNFRSF17Q02223 184 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PLOD1Q02809 727 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 GLO1Q04760 184 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 LIPEQ05469 1076 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 IFFO1Q0D2I5 559 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 OVGP1Q12889 678 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 STX5Q13190 355 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PMS2P3Q13401 168 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ADAM9Q13443 819 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ART3Q13508 389 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 TUBB3Q13509 450 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 RRP1BQ14684 758 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 FAM187BQ17R55 369 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 HFEQ30201 348 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZCWPW2Q504Y3 356 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 PDCD4Q53EL6 469 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZRANB3Q5FWF4 1079 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 FAM69AQ5T7M9 428 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 THEMIS2Q5TEJ8 643 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ARL6IP4Q66PJ3 421 aaKnown RBP4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 KIAA1161Q6NSJ0 714 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 HMBOX1Q6NT76 420 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 TMEM71Q6P5X7 295 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZCCHC12Q6PEW1 402 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ISLR2Q6UXK2 745 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ETV3LQ6ZN32 361 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 CLEC17AQ6ZS10 378 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 ZNF365Q70YC5 407 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 LRRC8DQ7L1W4 858 aa4.51□□□□□ -1.69
HMGB3P26-201ENST00000560051 OTOP1Q7RTM1 612 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms