RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CALCOCO2Q13137 446 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 FZD5Q13467 585 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 RFTN1Q14699 578 aaPredicted RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 POU6F1Q14863 301 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 EIF4HQ15056 248 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 TPSAB1Q15661 275 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 SLC1A5Q15758 541 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 UAP1Q16222 522 aaPredicted RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 MYLK3Q32MK0 819 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 HNRNPA1L2Q32P51 320 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 INO80DQ53TQ3 878 aaPredicted RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 SIRPB2Q5JXA9 342 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 CCDC70Q6NSX1 233 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 WDR93Q6P2C0 686 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 CCNI2Q6ZMN8 369 aaPredicted RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 RFLNAQ6ZTI6 216 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 PARS2Q7L3T8 475 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 TSPAN33Q86UF1 283 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 LRRC49Q8IUZ0 686 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 MMAAQ8IVH4 418 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.24□□□□□ -1.57
SPG11-220ENST00000559933 KLHDC8BQ8IXV7 354 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 IFT20Q8IY31 132 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 UNC5BQ8IZJ1 945 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 BBS5Q8N3I7 341 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 ZCCHC9Q8N567 271 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 PCDH20Q8N6Y1 951 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 BLOC1S5Q8TDH9 187 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 AENQ8WTP8 325 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 NAT14Q8WUY8 206 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 ATXN2LQ8WWM7 1075 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 EXOC4Q96A65 974 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 LRRC45Q96CN5 670 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 CFAP36Q96G28 342 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 C9orf72Q96LT7 481 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 ZNF778Q96MU6 729 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 KLHL32Q96NJ5 620 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 FMO2Q99518 471 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 VAT1Q99536 393 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 FSD1LQ9BXM9 530 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 CEP44Q9C0F1 390 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 C8orf33Q9H7E9 229 aaPredicted RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 LRRC40Q9H9A6 602 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 TBC1D17Q9HA65 648 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 CD248Q9HCU0 757 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 LTB4R2Q9NPC1 389 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 TRPV5Q9NQA5 729 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 FAM114A2Q9NRY5 505 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 DONSONQ9NYP3 566 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 PRKAG3Q9UGI9 489 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 SLC2A6Q9UGQ3 507 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 IL36AQ9UHA7 158 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 RAPGEFL1Q9UHV5 662 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 RAB21Q9UL25 225 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 PLA2G4CQ9UP65 541 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 SHOC2Q9UQ13 582 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 SCN8AQ9UQD0 1980 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 EDDM13A0A1B0GTR0 161 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 TCRBV21S2A2A0A5A6 115 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 OR51F1A6NGY5 319 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 NPIPB15A6NHN6 443 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 GOLGA8KD6RF30 607 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 GOLGA8TH3BQL2 631 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 KPNA3O00505 521 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 MID1O15344 667 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 HTRA2O43464 458 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 PI15O43692 258 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ANXA9O76027 345 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 SUN1O94901 812 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 PGLSO95336 258 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ACSL3O95573 720 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 IL1BP01584 269 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 SHBGP04278 402 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 SERPINF2P08697 491 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 PRSS56P0CW18 603 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 CHRNB1P11230 501 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 DRD1P21728 446 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 LHCGRP22888 699 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 NMBRP28336 390 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 TNFRSF8P28908 595 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 GSTT1P30711 240 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 CA5AP35218 305 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 DRD3P35462 400 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 MAGEA3P43357 314 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 TNFRSF4P43489 277 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ABCG1P45844 678 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 RECQLP46063 649 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 ARL4CP56559 192 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 GEMIN4P57678 1058 aaKnown RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 GPX6P59796 221 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 AP1S1P61966 158 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 SNRPD1P62314 119 aaKnown RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 ZXDAP98168 799 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 CDK18Q07002 472 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 BCL2L1Q07817 233 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 MPP3Q13368 585 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 MSLNQ13421 630 aaPredicted RBP5.23□□□□□ -1.57
SPG11-220ENST00000559933 CUL1Q13616 776 aa5.23□□□□□ -1.57
SPG11-220ENST00000559933 ENPP2Q13822 863 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms