RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 FGF22Q9HCT0 170 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 MRPL40Q9NQ50 206 aaKnown RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 FAM207AQ9NSI2 230 aaPredicted RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 ADAM22Q9P0K1 906 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 FRRS1LQ9P0K9 344 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 SIRPGQ9P1W8 387 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ACSL6Q9UKU0 697 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 HPCAL4Q9UM19 191 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ST14Q9Y5Y6 855 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 DGKBQ9Y6T7 804 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 COL12A1Q99715 3063 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 ZSCAN5CA6NGD5 496 aaPredicted RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 GOLGA6L19H0YKK7 550 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 TRAFD1O14545 582 aaPredicted RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 PLD2O14939 933 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 CREB3O43889 395 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 PRAMEF11O60813 436 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 IGSF6O95976 241 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 PEX11BO96011 259 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 RPLP0P05388 317 aaKnown RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 ITGB6P18564 788 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 ITIH1P19827 911 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 CCKBRP32239 447 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 SOX11P35716 441 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 TRIM23P36406 574 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 ETV5P41161 510 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 ZNF165P49910 485 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 SUOXP51687 545 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 ARSDP51689 593 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 RHOAP61586 193 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 B4GALNT1Q00973 533 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 SPIDRQ14159 915 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 PTPRRQ15256 657 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 PARP15Q460N3 678 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 ENPP7Q6UWV6 458 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 LIPIQ6XZB0 460 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 TRIM72Q6ZMU5 477 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 CCDC81Q6ZN84 652 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 RAB11FIP2Q7L804 512 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 C17orf82Q86X59 251 aaPredicted RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 DNAAF5Q86Y56 855 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 NRROSQ86YC3 692 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 C1QL4Q86Z23 238 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 SLITRK4Q8IW52 837 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 CBARPQ8N350 705 aaPredicted RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 FSTL5Q8N475 847 aaPredicted RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 ARL14Q8N4G2 192 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 NPWQ8N729 165 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 TSEN2Q8NCE0 465 aaKnown RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 MSANTD4Q8NCY6 345 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 WDR48Q8TAF3 677 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 PMEPA1Q969W9 287 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 COL26A1Q96A83 441 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 MED8Q96G25 268 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 CELF6Q96J87 481 aaKnown RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 MCEEQ96PE7 176 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 CCNL2Q96S94 520 aaPredicted RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 TRIM7Q9C029 511 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 TMEM168Q9H0V1 697 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 LRRN3Q9H3W5 708 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 FANCLQ9NW38 375 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 GPATCH2LQ9NWQ4 482 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 TAS2R14Q9NYV8 317 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 FOXJ2Q9P0K8 574 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 GULP1Q9UBP9 304 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 APPL1Q9UKG1 709 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 GPR34Q9UPC5 381 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 ATP8A1Q9Y2Q0 1164 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 DAAM1Q9Y4D1 1078 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 PCDHGA7Q9Y5G6 932 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 GPC6Q9Y625 555 aaPredicted RBP5.82□□□□□ -1.48
USP3-215ENST00000559771 RNF215Q9Y6U7 377 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 RELNP78509 3460 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 SDK2Q58EX2 2172 aa5.82□□□□□ -1.48
USP3-215ENST00000559771 PRAMEF33A0A0G2JMD5 474 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 CFAP69A5D8W1 941 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 CAPN8A6NHC0 703 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 LRRC10BA6NIK2 292 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 TMEM110-MUSTN1A8MSY1 372 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 PES1O00541 588 aaKnown RBP5.81□□□□□ -1.48
USP3-215ENST00000559771 NVLO15381 856 aaKnown RBP5.81□□□□□ -1.48
USP3-215ENST00000559771 B4GAT1O43505 415 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 PRAMEF10O60809 474 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 RECQL5O94762 991 aaPredicted RBP5.81□□□□□ -1.48
USP3-215ENST00000559771 RASGRP1O95267 797 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 PCCBP05166 539 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 CALB1P05937 261 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 HOXC4P09017 264 aaPredicted RBP5.81□□□□□ -1.48
USP3-215ENST00000559771 ALPIP09923 528 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 CR2P20023 1033 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 STAT1P42224 750 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 NSFP46459 744 aaKnown RBP5.81□□□□□ -1.48
USP3-215ENST00000559771 CSNK1DP48730 415 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 PAPOLAP51003 745 aaKnown RBP5.81□□□□□ -1.48
USP3-215ENST00000559771 COPB1P53618 953 aaKnown RBP5.81□□□□□ -1.48
USP3-215ENST00000559771 INHBCP55103 352 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 KIAA1024LP59773 190 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 TPM4P67936 248 aa5.81□□□□□ -1.48
USP3-215ENST00000559771 RAD51Q06609 339 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms