RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 EDEM3Q9BZQ6 932 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 OR10A4Q9H209 315 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 TAOK3Q9H2K8 898 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 STN1Q9H668 368 aaKnown RBP3.77□□□□□ -1.81
SPG11-218ENST00000559754 HCFC1R1Q9NWW0 138 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 ALKBH4Q9NXW9 302 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 DONSONQ9NYP3 566 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 SMARCAL1Q9NZC9 954 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 MORF4L1Q9UBU8 362 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 ZNF215Q9UL58 517 aaPredicted RBP3.77□□□□□ -1.81
SPG11-218ENST00000559754 PCDHGB4Q9UN71 923 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 PCDHGB5Q9Y5G0 923 aa3.77□□□□□ -1.81
SPG11-218ENST00000559754 IGHV4OR15-8A0A075B7B6 117 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 hDV102S1A0JD36 115 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 CPED1A4D0V7 1026 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 PRAC2D3DTV9 90 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 PTGES3LE9PB15 166 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 J3KR12 359 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 TULP2O00295 520 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 PEX12O00623 359 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 TNPO2O14787 897 aaKnown RBP3.76□□□□□ -1.81
SPG11-218ENST00000559754 CEP104O60308 925 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 SOCS5O75159 536 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 ATP2C2O75185 946 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 TBCAO75347 108 aaKnown RBP3.76□□□□□ -1.81
SPG11-218ENST00000559754 BEST1O76090 585 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 GAS8-AS1O95177 125 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 PMS2P2O95744 297 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 CLTBP09497 229 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 SCG2P13521 617 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 CD58P19256 250 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 CD72P21854 359 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 MUTP22033 750 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 TCEA1P23193 301 aaKnown RBP3.76□□□□□ -1.81
SPG11-218ENST00000559754 GPTP24298 496 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 TM4SF1P30408 202 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 HOXC13P31276 330 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 GPD2P43304 727 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 RPS3AP61247 264 aaKnown RBP3.76□□□□□ -1.81
SPG11-218ENST00000559754 CES5AQ6NT32 575 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 FAM122CQ6P4D5 195 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 CYP20A1Q6UW02 462 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 TUBA1AQ71U36 451 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 GALNTL5Q7Z4T8 443 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 TAGAPQ8N103 731 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 SRBD1Q8N5C6 995 aaKnown RBP3.76□□□□□ -1.81
SPG11-218ENST00000559754 ARRDC2Q8TBH0 407 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 KCNG4Q8TDN1 519 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 NOC3LQ8WTT2 800 aaKnown RBP3.76□□□□□ -1.81
SPG11-218ENST00000559754 TUBA1CQ9BQE3 449 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 PHF7Q9BWX1 381 aaPredicted RBP3.76□□□□□ -1.81
SPG11-218ENST00000559754 USP44Q9H0E7 712 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 EVA1AQ9H8M9 152 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 UBTD1Q9HAC8 227 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 BRF2Q9HAW0 419 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 VEZTQ9HBM0 779 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 CYSLTR2Q9NS75 346 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 ABCF3Q9NUQ8 709 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 SLC25A10Q9UBX3 287 aaPredicted RBP3.76□□□□□ -1.81
SPG11-218ENST00000559754 SLCO3A1Q9UIG8 710 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 CAMK2AQ9UQM7 478 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 PCDHAC2Q9Y5I4 1007 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 SNX9Q9Y5X1 595 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 SNX5Q9Y5X3 404 aa3.76□□□□□ -1.81
SPG11-218ENST00000559754 SOS1Q07889 1333 aaPredicted RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 ATXN2Q99700 1313 aaKnown RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 GAGE10A6NGK3 116 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 SH2D7A6NKC9 451 aaPredicted RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 NPIPB11E5RHQ5 1161 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 HSPA12AO43301 675 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 SP1P08047 785 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 SRD5A1P18405 259 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 DGKAP23743 735 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 CHATP28329 748 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 SSTR2P30874 369 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 RYKP34925 604 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 BSGP35613 385 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 GGT5P36269 586 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 RGS2P41220 211 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 CLK1P49759 484 aaKnown RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 SNX16P57768 344 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 TNFAIP1Q13829 316 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 ARHGEF6Q15052 776 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 PPP6R3Q5H9R7 873 aaPredicted RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 PLEKHS1Q5SXH7 462 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 C9orf139Q6ZV77 190 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 IKBIPQ70UQ0 350 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 TBC1D26Q86UD7 250 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 ZC3HC1Q86WB0 502 aaKnown RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 NDUFAF2Q8N183 169 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 LSM14AQ8ND56 463 aaKnown RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 SCFD2Q8WU76 684 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 SORCS1Q8WY21 1168 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 CD101Q93033 1021 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 NR1H4Q96RI1 486 aaPredicted RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 EYA3Q99504 573 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 INTS2Q9H0H0 1204 aaKnown RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 SIL1Q9H173 461 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 RANBP17Q9H2T7 1088 aaKnown RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 EPHX3Q9H6B9 360 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms