RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 IFT20Q8IY31 132 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 PELI3Q8N2H9 469 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 OR13C4Q8NGS5 318 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 FOXJ1Q92949 421 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 NAT9Q9BTE0 207 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 TXLNGYQ9BZA5 131 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 GPR63Q9BZJ6 419 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 IL26Q9NPH9 171 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 INVSQ9Y283 1065 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 COQ6Q9Y2Z9 468 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 SLCO1B1Q9Y6L6 691 aa14.77□□□□□ -0.05
SNRPA1-207ENST00000559309 TRBV5-4A0A0C4DH59 114 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 NEMP1O14524 444 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 RAD51BO15315 384 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 BANF1O75531 89 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 USP1O94782 785 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 C1QAP02745 245 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 CD27P26842 260 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 ARSDP51689 593 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 RPL6Q02878 288 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 MTM1Q13496 603 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 FASTKD3Q14CZ7 662 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 ERCC6LQ2NKX8 1250 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 CCDC38Q502W7 563 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 SETMARQ53H47 684 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 ZDHHC20Q5W0Z9 365 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 PDPK2PQ6A1A2 396 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 ABI3BPQ7Z7G0 1075 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 CCNJLQ8IV13 435 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 OR4K2Q8NGD2 314 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 CDKN2AIPNLQ96HQ2 116 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 BMFQ96LC9 184 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 FCRL3Q96P31 734 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 MBNL1Q9NR56 388 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 RAD18Q9NS91 495 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 PKD2L2Q9NZM6 624 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 RAB21Q9UL25 225 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 TMPRSS11EQ9UL52 423 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 HS3ST3A1Q9Y663 406 aa14.76□□□□□ -0.05
SNRPA1-207ENST00000559309 A0A1W2PR77 199 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 CTIFO43310 598 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 NDUFS2O75306 463 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 PAK4O96013 591 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 HOXC4P09017 264 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 HNRNPA2B1P22626 353 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 NMBRP28336 390 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 IGFALSP35858 605 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 HADHAP40939 763 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 ELK3P41970 407 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 PTGER3P43115 390 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 PFN3P60673 137 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 ANKRD20A4Q4UJ75 823 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 DNAJC21Q5F1R6 531 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 KIAA0930Q6ICG6 404 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 CCNI2Q6ZMN8 369 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 GCNT7Q6ZNI0 430 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 CYS1Q717R9 158 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 TRAM1L1Q8N609 369 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 GPR161Q8N6U8 529 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 PPHLN1Q8NEY8 458 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 SCAMP4Q969E2 229 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 NUS1Q96E22 293 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 MFSD3Q96ES6 412 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 DNAJC1Q96KC8 554 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 AGAP2Q99490 1192 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 TRIM56Q9BRZ2 755 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 FUT8Q9BYC5 575 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 SMOXQ9NWM0 555 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 SLC2A6Q9UGQ3 507 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 CNOT6Q9ULM6 557 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 NFU1Q9UMS0 254 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 FAM169AQ9Y6X4 670 aa14.75□□□□□ -0.05
SNRPA1-207ENST00000559309 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 FADS2P1A8MWK0 482 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 PRAMEF26H0Y7S4 382 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 K7ESM1 405 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 TOR1BO14657 336 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 STX7O15400 261 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 BUD23O43709 281 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 PGAM1P18669 254 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 CA5AP35218 305 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 SPAM1P38567 509 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 PDIA2Q13087 525 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 LRRC14Q15048 493 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 ACOX1Q15067 660 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 IRF4Q15306 451 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 SKIDA1Q1XH10 827 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 ADAMTSL4Q6UY14 1074 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 CENPUQ71F23 418 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 LPCAT2Q7L5N7 544 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 TMEFF1Q8IYR6 380 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 PAF1Q8N7H5 531 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 SUMF1Q8NBK3 374 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 PLA2G15Q8NCC3 412 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 FAM174AQ8TBP5 190 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 UBXN4Q92575 508 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 STAMBPL1Q96FJ0 436 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 COX14Q96I36 57 aa14.74□□□□□ -0.05
SNRPA1-207ENST00000559309 LOXL4Q96JB6 756 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms