RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 NMBRP28336 390 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 PMLP29590 882 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 DRD3P35462 400 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 MSH2P43246 934 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 POLD2P49005 469 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 TTPAP49638 278 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 LIG3P49916 1009 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 GPX6P59796 221 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 SEMG2Q02383 582 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 PTSQ03393 145 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 CACNG1Q06432 222 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 SGCGQ13326 291 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 ACOX1Q15067 660 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 AGERQ15109 404 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 PIP5KL1Q5T9C9 394 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 AGBL4Q5VU57 503 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 NEPROQ6NW34 567 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 LIPIQ6XZB0 460 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 SLC36A4Q6YBV0 504 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 MICALCLQ6ZW33 695 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 RASSF3Q86WH2 238 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 TDRPQ86YL5 185 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 IGDCC3Q8IVU1 814 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 CNTN4Q8IWV2 1026 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 IQCKQ8N0W5 287 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 AADATQ8N5Z0 425 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 OR2T34Q8NGX1 318 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 OR14C36Q8NHC7 312 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 FAM174AQ8TBP5 190 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 HMGB4Q8WW32 186 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 HDAC10Q969S8 669 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 SPACA7Q96KW9 195 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 CPNE1Q99829 537 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 CATSPERZQ9NTU4 200 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 INTS10Q9NVR2 710 aaKnown RBP12.38□□□□□ -0.43
TPM1-209ENST00000558072 USP36Q9P275 1121 aaKnown RBP12.38□□□□□ -0.43
TPM1-209ENST00000558072 ZNF180Q9UJW8 692 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 FAM159BA6NKW6 160 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 TOR1BO14657 336 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 RASGRF2O14827 1237 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 BANF1O75531 89 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 KRT38O76015 456 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 TEAD1P28347 426 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 CSE1LP55060 971 aaKnown RBP12.37□□□□□ -0.43
TPM1-209ENST00000558072 DPTQ07507 201 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 DNAJC3Q13217 504 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 MTM1Q13496 603 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 GRTP1Q5TC63 336 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 MARK2Q7KZI7 788 aaKnown RBP12.37□□□□□ -0.43
TPM1-209ENST00000558072 BMP8AQ7Z5Y6 402 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 SNX20Q7Z614 316 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 CTAGE3PQ8IX95 158 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
TPM1-209ENST00000558072 TRAM1L1Q8N609 369 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 OTUD6BQ8N6M0 293 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 OR13J1Q8NGT2 312 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 MTBPQ96DY7 904 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 DNAJC1Q96KC8 554 aaKnown RBP12.37□□□□□ -0.43
TPM1-209ENST00000558072 TBATAQ96M53 351 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 TPSD1Q9BZJ3 242 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 SERGEFQ9UGK8 458 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 RABGEF1Q9UJ41 708 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 PLAAQ9Y263 795 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 COMMD10Q9Y6G5 202 aa12.37□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3DA0A087WVF3 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3IA0A087WXS9 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3EA0A087X179 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3KA0A087X1G2 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 IQANK1A0A1B0GTG1 560 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3FA6NER0 549 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3LB9A6J9 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 CFAP99D6REC4 459 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 QSOX1O00391 747 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 CD3EAPO15446 510 aaKnown RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 RNGTTO60942 597 aaKnown RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 KRT37O76014 449 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 SRP72O76094 671 aaKnown RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 SLC4A1P02730 911 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3HP0C7X1 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 RALBP11234 206 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 BPIP17213 487 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 LHCGRP22888 699 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 CD6P30203 668 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 MC4RP32245 332 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 SPRP35270 261 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 GP5P40197 560 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 ARCN1P48444 511 aaKnown RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 TPMTP51580 245 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 ADPRHP54922 357 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 RALGDSQ12967 914 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 UAP1Q16222 522 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 USP39Q53GS9 565 aaKnown RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 SETMARQ53H47 684 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 HSP90B2PQ58FF3 399 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 HSP90AA5PQ58FG0 334 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3GQ6DHY5 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3CQ6IPX1 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 ANO7Q6IWH7 933 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 CAPN12Q6ZSI9 719 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms