RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 IGFALSP35858 605 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 HSPA9P38646 679 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 MMP12P39900 470 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 TNNT3P45378 269 aaPredicted RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 MMP13P45452 471 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 RXRGP48443 463 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 LIG3P49916 1009 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 BLKP51451 505 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 SUOXP51687 545 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 POLR2LP62875 67 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 PPARDQ03181 441 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 IL10RBQ08334 325 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 CYP4F3Q08477 520 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 ILKQ13418 452 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 ARHGEF7Q14155 803 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 NR1I3Q14994 352 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 ACAP1Q15027 740 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 SHBQ15464 509 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 NR0B2Q15466 257 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 CDKN3Q16667 212 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 BOLA3Q53S33 107 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 FIGNQ5HY92 759 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 SPECC1LQ69YQ0 1117 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 ESRP1Q6NXG1 681 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 ZCCHC8Q6NZY4 707 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 ALKBH5Q6P6C2 394 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 CRTC1Q6UUV9 634 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 CCNI2Q6ZMN8 369 aaPredicted RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 MACC1Q6ZN28 852 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 USP45Q70EL2 814 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 EFL1Q7Z2Z2 1120 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 ZAR1Q86SH2 424 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 SRLQ86TD4 932 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 TMPRSS12Q86WS5 348 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 CAMK1DQ8IU85 385 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 PSTKQ8IV42 348 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 MAP7D3Q8IWC1 876 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 RBFAQ8N0V3 343 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 NDUFAF2Q8N183 169 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 NPWQ8N729 165 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 KCTD6Q8NC69 237 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 IFI44Q8TCB0 444 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 SYN2Q92777 582 aaPredicted RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 FAM131CQ96AQ9 280 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 ZNF641Q96N77 438 aaPredicted RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 CSPG4P5Q96PW8 444 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 DEPDC7Q96QD5 511 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 TRIM56Q9BRZ2 755 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 NOL6Q9H6R4 1146 aaKnown RBP6.32□□□□□ -1.4
IDH3A-204ENST00000558016 WDR26Q9H7D7 661 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 NT5MQ9NPB1 228 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 UCKL1Q9NWZ5 548 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 DKK3Q9UBP4 350 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 GULP1Q9UBP9 304 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 LCMT1Q9UIC8 334 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 CAPN11Q9UMQ6 739 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 CLCA2Q9UQC9 943 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 HS3ST3A1Q9Y663 406 aa6.32□□□□□ -1.4
IDH3A-204ENST00000558016 TMEM131Q92545 1883 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 A0A087X0T9 212 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 SPTY2D1-AS1A0A0U1RR47 76 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 LRRD1A4D1F6 860 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 SRRM3A6NNA2 597 aaPredicted RBP6.31□□□□□ -1.4
IDH3A-204ENST00000558016 B4DGG1 531 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 RNF103O00237 685 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 TRIM38O00635 465 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 RRP8O43159 456 aaKnown RBP6.31□□□□□ -1.4
IDH3A-204ENST00000558016 SPOPO43791 374 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 MFSD11O43934 449 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 RASGRP1O95267 797 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 IPO7O95373 1038 aaKnown RBP6.31□□□□□ -1.4
IDH3A-204ENST00000558016 CD160O95971 181 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 B3GALT4O96024 378 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 KRT1P04264 644 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 KRT7P08729 469 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 ALPIP09923 528 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 H2AFZP0C0S5 128 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 FAM228BP0C875 321 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 CYP2A6P11509 494 aaPredicted RBP6.31□□□□□ -1.4
IDH3A-204ENST00000558016 MYF5P13349 255 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 ITIH2P19823 946 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 EIF4A3P38919 411 aaKnown RBP6.31□□□□□ -1.4
IDH3A-204ENST00000558016 ABCG1P45844 678 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 MAXP61244 160 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 E2F1Q01094 437 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 TARDBPQ13148 414 aaKnown RBP eCLIP6.31□□□□□ -1.4
IDH3A-204ENST00000558016 C1orf61Q13536 156 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 DPYSQ14117 519 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 FGL2Q14314 439 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 FZD2Q14332 565 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 NFATC4Q14934 902 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 ELOCQ15369 112 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 CYTH1Q15438 398 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 DPYSL2Q16555 572 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 UGP2Q16851 508 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 HP1BP3Q5SSJ5 553 aaPredicted RBP6.31□□□□□ -1.4
IDH3A-204ENST00000558016 MARC1Q5VT66 337 aa6.31□□□□□ -1.4
IDH3A-204ENST00000558016 RAET1GQ6H3X3 334 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms