RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 ENGP17813 658 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 GM2AP17900 193 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 GRIA1P42261 906 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
RCCD1-209ENST00000557750 CLDN2P57739 230 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 MRPS25P82663 173 aaKnown RBP12.22□□□□□ -0.45
RCCD1-209ENST00000557750 CDH17Q12864 832 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 TERF2Q15554 542 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 DUOXA1Q1HG43 343 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 PEAR1Q5VY43 1037 aaPredicted RBP12.22□□□□□ -0.45
RCCD1-209ENST00000557750 DENND5AQ6IQ26 1287 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 LAYNQ6UX15 382 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 Q6ZVL8 140 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 ZNF572Q7Z3I7 529 aaPredicted RBP12.22□□□□□ -0.45
RCCD1-209ENST00000557750 MAATS1Q7Z4T9 603 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 RABEPKQ7Z6M1 372 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 PIP4P1Q86T03 277 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 TMEM145Q8NBT3 493 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 DENND6BQ8NEG7 585 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 MNS1Q8NEH6 495 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 C1orf216Q8TAB5 229 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 CEP76Q8TAP6 659 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 DTD2Q96FN9 168 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 LENG8Q96PV6 779 aaPredicted RBP12.22□□□□□ -0.45
RCCD1-209ENST00000557750 KLF6Q99612 283 aaPredicted RBP12.22□□□□□ -0.45
RCCD1-209ENST00000557750 TRIM51Q9BSJ1 452 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 NUSAP1Q9BXS6 441 aaKnown RBP12.22□□□□□ -0.45
RCCD1-209ENST00000557750 SLC32A1Q9H598 525 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 ARNT2Q9HBZ2 717 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 PKD2L2Q9NZM6 624 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 CD84Q9UIB8 345 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 KLK13Q9UKR3 277 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 NEUROG3Q9Y4Z2 214 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 PLXND1Q9Y4D7 1925 aa12.22□□□□□ -0.45
RCCD1-209ENST00000557750 FREM2Q5SZK8 3169 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 TCRBV7S3A2A0A539 114 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 H0Y8X5 98 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 TPSB2P20231 275 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 CD38P28907 300 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 CSNK1EP49674 416 aaKnown RBP12.21□□□□□ -0.45
RCCD1-209ENST00000557750 AGERQ15109 404 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 IRF4Q15306 451 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 TEAD4Q15561 434 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 TPSAB1Q15661 275 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 WSCD2Q2TBF2 565 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 GCNT7Q6ZNI0 430 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 RFLNAQ6ZTI6 216 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 TMC3Q7Z5M5 1100 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 CBARPQ8N350 705 aaPredicted RBP12.21□□□□□ -0.45
RCCD1-209ENST00000557750 TP53I13Q8NBR0 393 aaPredicted RBP12.21□□□□□ -0.45
RCCD1-209ENST00000557750 CPT1BQ92523 772 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 CENPTQ96BT3 561 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 EID2BQ96D98 161 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 FSCN3Q9NQT6 498 aa12.21□□□□□ -0.45
RCCD1-209ENST00000557750 MBNL1Q9NR56 388 aaKnown RBP12.21□□□□□ -0.45
RCCD1-209ENST00000557750 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.21□□□□□ -0.45
RCCD1-209ENST00000557750 CTAGE15A4D2H0 777 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 POM121BA6NF01 834 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 C2orf81A6NN90 581 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 RAD51CO43502 376 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 BUD23O43709 281 aaKnown RBP12.2□□□□□ -0.46
RCCD1-209ENST00000557750 CRTAMO95727 393 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 CTAGE8P0CG41 777 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 IGFALSP35858 605 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 HMGCLP35914 325 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 SPINT3P49223 89 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 C21orf59P57076 290 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 SIM1P81133 766 aaPredicted RBP12.2□□□□□ -0.46
RCCD1-209ENST00000557750 SARNPP82979 210 aaKnown RBP12.2□□□□□ -0.46
RCCD1-209ENST00000557750 CDK16Q00536 496 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 SEPT6Q14141 434 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 KCNJ11Q14654 390 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 POU6F1Q14863 301 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 ANKRD22Q5VYY1 191 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 KDM7AQ6ZMT4 941 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 PTAR1Q7Z6K3 402 aaPredicted RBP12.2□□□□□ -0.46
RCCD1-209ENST00000557750 TECPR1Q7Z6L1 1165 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 CTAGE6Q86UF2 777 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 CTAGE4Q8IX94 777 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 BRSK1Q8TDC3 778 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 SCAMP4Q969E2 229 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 SKA1Q96BD8 255 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 AP2M1Q96CW1 435 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 TRIM31Q9BZY9 425 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 BPIFA1Q9NP55 256 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 CASS4Q9NQ75 786 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 KCTD5Q9NXV2 234 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 FAM53CQ9NYF3 392 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 FNDC3AQ9Y2H6 1198 aaKnown RBP12.2□□□□□ -0.46
RCCD1-209ENST00000557750 MSRB2Q9Y3D2 182 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 PKP3Q9Y446 797 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 HS3ST3A1Q9Y663 406 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 ARL5AQ9Y689 179 aa12.2□□□□□ -0.46
RCCD1-209ENST00000557750 A0A1B0GVT2 93 aa12.19□□□□□ -0.46
RCCD1-209ENST00000557750 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
RCCD1-209ENST00000557750 A6NNZ2 444 aa12.19□□□□□ -0.46
RCCD1-209ENST00000557750 GOLGA8MH3BSY2 632 aa12.19□□□□□ -0.46
RCCD1-209ENST00000557750 DNALI1O14645 258 aaPredicted RBP12.19□□□□□ -0.46
RCCD1-209ENST00000557750 TMEM63AO94886 807 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms