RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 UBP1Q9NZI7 540 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 KLQ9UEF7 1012 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 APOBEC3BQ9UH17 382 aaKnown RBP12.47□□□□□ -0.41
SLIRP-211ENST00000557623 AAR2Q9Y312 384 aaKnown RBP12.47□□□□□ -0.41
SLIRP-211ENST00000557623 PCDHB3Q9Y5E6 796 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 ARID1BQ8NFD5 2236 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-211ENST00000557623 CNOT1A5YKK6 2376 aaKnown RBP12.46□□□□□ -0.41
SLIRP-211ENST00000557623 LOC285095A0A1B0GVY8 99 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 C5orf60A6NFR6 353 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 ENC1O14682 589 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 TNFRSF10CO14798 259 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 SCAMP1O15126 338 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 AQP9O43315 295 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 TNFP01375 233 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 FTH1P19P0C7X4 201 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 MYCLP1P12525 358 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-211ENST00000557623 CTSEP14091 401 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 HLA-DPA1P20036 260 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 GPR1P46091 355 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 SPINT3P49223 89 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 HK3P52790 923 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 SRP54P61011 504 aaKnown RBP12.46□□□□□ -0.41
SLIRP-211ENST00000557623 HEATR4Q86WZ0 1026 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 SLC13A5Q86YT5 568 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-211ENST00000557623 HID1Q8IV36 788 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 SDR16C5Q8N3Y7 309 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 FSTL5Q8N475 847 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-211ENST00000557623 ZNF548Q8NEK5 533 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-211ENST00000557623 IPMKQ8NFU5 416 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 OR56A4Q8NGH8 313 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 OR4C6Q8NH72 309 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 SLC35B2Q8TB61 432 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 LMX1AQ8TE12 382 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 MAIP1Q8WWC4 291 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 PDLIM2Q96JY6 352 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 MRGPRX2Q96LB1 330 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 SMIM14Q96QK8 99 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 FAM118BQ9BPY3 351 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 FSD1LQ9BXM9 530 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 TEX101Q9BY14 249 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 GPR63Q9BZJ6 419 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 CDH19Q9H159 772 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 ABCG8Q9H221 673 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 TRABDQ9H4I3 376 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 USP29Q9HBJ7 922 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 UCKL1Q9NWZ5 548 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 CD84Q9UIB8 345 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 KLF15Q9UIH9 416 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 ZNF711Q9Y462 761 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 DGKBQ9Y6T7 804 aa12.46□□□□□ -0.41
SLIRP-211ENST00000557623 PTPRBP23467 1997 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 A0A0U1RQS6 177 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 K7ESM1 405 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 TPP1O14773 563 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 FFAR2O15552 330 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 FGF1P05230 155 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 CDK4P11802 303 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 MSNP26038 577 aaKnown RBP12.45□□□□□ -0.42
SLIRP-211ENST00000557623 PMLP29590 882 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 STIP1P31948 543 aaKnown RBP12.45□□□□□ -0.42
SLIRP-211ENST00000557623 CDK3Q00526 305 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 ELOCQ15369 112 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 SLC1A5Q15758 541 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 PRRT3Q5FWE3 981 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 ADAMTSL4Q6UY14 1074 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 ARHGEF18Q6ZSZ5 1173 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 LYSMD3Q7Z3D4 306 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 TMC3Q7Z5M5 1100 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 RBFAQ8N0V3 343 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 CCDC110Q8TBZ0 833 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 TSACCQ96A04 125 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-211ENST00000557623 OXNAD1Q96HP4 312 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-211ENST00000557623 FAM83DQ9H4H8 585 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 HACD3Q9P035 362 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 DOLKQ9UPQ8 538 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 PCDHGA1Q9Y5H4 931 aa12.45□□□□□ -0.42
SLIRP-211ENST00000557623 ZFC3H1O60293 1989 aaKnown RBP12.45□□□□□ -0.42
SLIRP-211ENST00000557623 TCRBV7S2A1N4TA0A589 114 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 TMEM202A6NGA9 273 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 F5H423 210 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 TRIM38O00635 465 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 SIGLEC6O43699 453 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 GCATO75600 419 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 ANXA6P08133 673 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 ATXN1LP0C7T5 689 aaKnown RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 CKMT2P17540 419 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 PSMB4P28070 264 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 DUSP3P51452 185 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 DAB2P98082 770 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 FOXC1Q12948 553 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 PARP6Q2NL67 630 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 P3H1Q32P28 736 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 SIRPB2Q5JXA9 342 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 ZCCHC8Q6NZY4 707 aaKnown RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 LVRNQ6Q4G3 990 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 RFLNAQ6ZTI6 216 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 RD3Q7Z3Z2 195 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 PELI3Q8N2H9 469 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 SLC25A41Q8N5S1 370 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms