RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TRABDQ9H4I3 376 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 WDR26Q9H7D7 661 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 KCTD5Q9NXV2 234 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 RNF14Q9UBS8 474 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 ARL5AQ9Y689 179 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 SPTY2D1-AS1A0A0U1RR47 76 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 SUN1O94901 812 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 GAS8O95995 478 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 BPIP17213 487 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 HMGCLP35914 325 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 YPEL5P62699 121 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 NFATC4Q14934 902 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 PPP1R7Q15435 360 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 SHBQ15464 509 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 HENMT1Q5T8I9 393 aaKnown RBP17.42■□□□□ 0.38
SHMT2-225ENST00000556798 MACC1Q6ZN28 852 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 LINC00523Q86TU6 105 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 NETO1Q8TDF5 533 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 FAM83DQ9H4H8 585 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 ERVMER34-1Q9H9K5 563 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 ARNT2Q9HBZ2 717 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 DNAAF2Q9NVR5 837 aaKnown RBP17.42■□□□□ 0.38
SHMT2-225ENST00000556798 DNAJC28Q9NX36 388 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 FEZ2Q9UHY8 353 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-225ENST00000556798 PNMA8BQ9ULN7 279 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-225ENST00000556798 KCTD3Q9Y597 815 aa17.42■□□□□ 0.38
SHMT2-225ENST00000556798 ZFC3H1O60293 1989 aaKnown RBP17.42■□□□□ 0.38
SHMT2-225ENST00000556798 A0A1B0GTQ1 180 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 TCRBV7S3A2A0A539 114 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 FADS2P1A8MWK0 482 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 CACNB4O00305 520 aaPredicted RBP17.41■□□□□ 0.38
SHMT2-225ENST00000556798 INPP4BO15327 924 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 SDC3O75056 442 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 TRIM23P36406 574 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 PTGIRP43119 386 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 CCT8P50990 548 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 ARHGAP8P85298 464 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 CDK3Q00526 305 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 EIF2B5Q13144 721 aaKnown RBP17.41■□□□□ 0.38
SHMT2-225ENST00000556798 SEPT6Q14141 434 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 PTK2BQ14289 1009 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 POU6F1Q14863 301 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 TAF1AQ15573 450 aaPredicted RBP17.41■□□□□ 0.38
SHMT2-225ENST00000556798 KCTD16Q68DU8 428 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 TRIM74Q86UV6 250 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 PARGQ86W56 976 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 DCP2Q8IU60 420 aaKnown RBP17.41■□□□□ 0.38
SHMT2-225ENST00000556798 RAVER1Q8IY67 606 aaKnown RBP17.41■□□□□ 0.38
SHMT2-225ENST00000556798 DNAAF3Q8N9W5 541 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 EIF2B3Q9NR50 452 aaKnown RBP17.41■□□□□ 0.38
SHMT2-225ENST00000556798 TM7SF3Q9NS93 570 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHMT2-225ENST00000556798 IL17CQ9P0M4 197 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 PCYOX1Q9UHG3 505 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 KLF15Q9UIH9 416 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 CDV3Q9UKY7 258 aaKnown RBP17.41■□□□□ 0.38
SHMT2-225ENST00000556798 BPTFQ12830 3046 aa17.41■□□□□ 0.38
SHMT2-225ENST00000556798 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-225ENST00000556798 RGSL1A5PLK6 1076 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 CCDC188H7C350 402 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 TOR1BO14657 336 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 SCAMP1O15126 338 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 URI1O94763 535 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-225ENST00000556798 MYCLP1P12525 358 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-225ENST00000556798 ARRB1P49407 418 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-225ENST00000556798 LIMK1P53667 647 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 KIAA1024LP59773 190 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 DCDC1P59894 354 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 CDH17Q12864 832 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 RSPO4Q2I0M5 234 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-225ENST00000556798 CERCAMQ5T4B2 595 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 ANKRD22Q5VYY1 191 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 ENPP7Q6UWV6 458 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 GATAD2AQ86YP4 633 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 RBFAQ8N0V3 343 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 OXR1Q8N573 874 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 OR4K2Q8NGD2 314 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 BRSK1Q8TDC3 778 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 WDR92Q96MX6 357 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 KRT12Q99456 494 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 SPATA16Q9BXB7 569 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 TEX101Q9BY14 249 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 TCEAL2Q9H3H9 227 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-225ENST00000556798 CASS4Q9NQ75 786 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 PHPT1Q9NRX4 125 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-225ENST00000556798 PKP3Q9Y446 797 aa17.4■□□□□ 0.38
SHMT2-225ENST00000556798 ARID1BQ8NFD5 2236 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-225ENST00000556798 CCDC78A2IDD5 438 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 TMEM202A6NGA9 273 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 STX7O15400 261 aaKnown RBP17.39■□□□□ 0.37
SHMT2-225ENST00000556798 LDB2O43679 373 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 TMEM63AO94886 807 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 CRTAMO95727 393 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 TPSB2P20231 275 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 LPOP22079 712 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-225ENST00000556798 HTR1BP28222 390 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 TEAD1P28347 426 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 EPHA8P29322 1005 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-225ENST00000556798 SPAM1P38567 509 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms