RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 ZNF358Q9NW07 568 aa7.7□□□□□ -1.18
HNRNPC-226ENST00000556628 GOLGA6AQ9NYA3 693 aa7.7□□□□□ -1.18
HNRNPC-226ENST00000556628 AMACRQ9UHK6 382 aa7.7□□□□□ -1.18
HNRNPC-226ENST00000556628 DNPEPQ9ULA0 475 aa7.7□□□□□ -1.18
HNRNPC-226ENST00000556628 TTLL3Q9Y4R7 772 aa7.7□□□□□ -1.18
HNRNPC-226ENST00000556628 SSU72P8A0A1W2PR75 194 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 TMEM202A6NGA9 273 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 TMX2-CTNND1H3BSU7 103 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 TNFRSF10CO14798 259 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 MATN3O15232 486 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 ZW10O43264 779 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 MFSD11O43934 449 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 HEXIM1O94992 359 aaKnown RBP7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 PGLSO95336 258 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 PEX11BO96011 259 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 MYCLP1P12525 358 aaPredicted RBP7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 CR2P20023 1033 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 MX2P20592 715 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 CCNCP24863 283 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 HNRNPH3P31942 346 aaKnown RBP7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 TRIM23P36406 574 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 GARSP41250 739 aaKnown RBP7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 ERVPABLB-1P60509 514 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 TRAF2Q12933 501 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 BIRC2Q13490 618 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 PEX6Q13608 980 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 DPYSL3Q14195 570 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 MESDQ14696 234 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 PAFAH1B3Q15102 231 aaKnown RBP7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 CNGA3Q16281 694 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 ATP13A4Q4VNC1 1196 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 ANKRD20A8PQ5CZ79 823 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 RAET1GQ6H3X3 334 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 FOXR1Q6PIV2 292 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 PGBD5Q8N414 524 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 ARL14Q8N4G2 192 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 KYQ8NBH2 561 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 CCNYQ8ND76 341 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 FAM46DQ8NEK8 389 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 KIAA1524Q8TCG1 905 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 OR1E3Q8WZA6 343 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 FUBP1Q96AE4 644 aaKnown RBP7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 PDXPQ96GD0 296 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 MRFAP1L1Q96HT8 127 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 CCDC42Q96M95 316 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 COQ10AQ96MF6 247 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 RBM15Q96T37 977 aaKnown RBP eCLIP7.69□□□□□ -1.181e-17■■■■■ 43.3
HNRNPC-226ENST00000556628 SEMA3CQ99985 751 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 DPEP2Q9H4A9 486 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 RBM22Q9NW64 420 aaKnown RBP eCLIP7.69□□□□□ -1.184e-23■■■■■ 28.1
HNRNPC-226ENST00000556628 PNMA8BQ9ULN7 279 aaPredicted RBP7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 SATB2Q9UPW6 733 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 ENTPD2Q9Y5L3 495 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 DGKBQ9Y6T7 804 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 IGF2RP11717 2491 aa7.69□□□□□ -1.18
HNRNPC-226ENST00000556628 FRYQ5TBA9 3013 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 CCDC187A0A096LP49 1063 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 PRSS38A1L453 326 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 B4DGG1 531 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 MAP3K6O95382 1288 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 PYGLP06737 847 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 CD48P09326 243 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 TMEM253P0C7T8 217 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 CCNB1P14635 433 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 ZNF30P17039 623 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 CTPS1P17812 591 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 IL4RP24394 825 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 ITPKBP27987 946 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 CDC25BP30305 580 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 MAN1A1P33908 653 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 ETV3P41162 512 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 GPR1P46091 355 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 ZNF75DP51815 510 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 UCNP55089 124 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 INHBCP55103 352 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 GALNT2Q10471 571 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 ILF3Q12906 894 aaKnown RBP eCLIP7.68□□□□□ -1.182e-7■■■□□ 15.2
HNRNPC-226ENST00000556628 SWI5Q1ZZU3 235 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 NCBP2-AS2Q69YL0 99 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 HEATR4Q86WZ0 1026 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 RHOT2Q8IXI1 618 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 TEX26Q8N6G2 289 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 GPR156Q8NFN8 814 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 WDR36Q8NI36 951 aaKnown RBP7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 FAM71BQ8TC56 605 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 KCNE4Q8WWG9 221 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 MAML1Q92585 1016 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 CCDC74AQ96AQ1 378 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 DTD2Q96FN9 168 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 ATXN7L3BQ96GX2 97 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 NAF1Q96HR8 494 aaKnown RBP7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 NSMCE3Q96MG7 304 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 TMEM74Q96NL1 305 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 FCRL3Q96P31 734 aaPredicted RBP7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 TSGA13Q96PP4 275 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 LGR4Q9BXB1 951 aa7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 MAK16Q9BXY0 300 aaKnown RBP7.68□□□□□ -1.18
HNRNPC-226ENST00000556628 PACSIN1Q9BY11 444 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms