RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PDAP1Q13442 181 aaKnown RBP18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 TUBB3Q13509 450 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 PTPRNQ16849 979 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 ZSWIM9Q86XI8 627 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 MAPK15Q8TD08 544 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 PTCD3Q96EY7 689 aaKnown RBP18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 NSL1Q96IY1 281 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 SPHK2Q9NRA0 654 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 APOBEC2Q9Y235 224 aaKnown RBP18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 UNC80Q8N2C7 3258 aa18.27■□□□□ 0.51
SDR39U1-220ENST00000556548 WISP3O95389 354 aaPredicted RBP18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 HNRNPLP14866 589 aaKnown RBP eCLIP18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 GPM6BQ13491 265 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 ACAP2Q15057 778 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 SLC9B1Q4ZJI4 515 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 TRIM67Q6ZTA4 783 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 LSMEM2Q8N112 164 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 OR2AP1Q8NGE2 309 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 UTP4Q969X6 686 aaKnown RBP18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 PTERQ96BW5 349 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 ZNF707Q96C28 371 aaPredicted RBP18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 CCDC68Q9H2F9 335 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 LRMDAQ9H2I8 198 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 PIDD1Q9HB75 910 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 CD248Q9HCU0 757 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 INTS10Q9NVR2 710 aaKnown RBP18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 IL17CQ9P0M4 197 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 HECAQ9UBI9 543 aaPredicted RBP18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 MRPS23Q9Y3D9 190 aaKnown RBP18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 SZT2Q5T011 3432 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 C1orf232A0A0U1RR37 186 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 CLDN7O95471 211 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 ATP5F1P24539 256 aaPredicted RBP18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 HNF1BP35680 557 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 ZNF77Q15935 545 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 FAM151BQ6UXP7 276 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 TMC5Q6UXY8 1006 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 ISCA2Q86U28 154 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 ATP13A3Q9H7F0 1226 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 MAGEE1Q9HCI5 957 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 NOTCH4Q99466 2003 aa18.26■□□□□ 0.51
SDR39U1-220ENST00000556548 GOLGA8QA0A0J9YX86 632 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 GOLGA8OA6NCC3 632 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 A8MT66 165 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 PRR5-ARHGAP8B1AHC4 643 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 GOLGA8NF8WBI6 632 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 NEMP1O14524 444 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 ESRRAP11474 423 aaPredicted RBP18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 IRX1P78414 480 aaPredicted RBP18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 ARHGAP8P85298 464 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 PFKPQ01813 784 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 EML3Q32P44 896 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 RALGPS1Q5JS13 557 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 WLSQ5T9L3 541 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 FAM219BQ5XKK7 198 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 PAQR3Q6TCH7 311 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 SORCS1Q8WY21 1168 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 LRRC3BQ96PB8 259 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 TBC1D10AQ9BXI6 508 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 ZDHHC6Q9H6R6 413 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 HACD3Q9P035 362 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 MED16Q9Y2X0 877 aa18.25■□□□□ 0.51
SDR39U1-220ENST00000556548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 TMEM233B4DJY2 109 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 H3BMM5 538 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 CCDC22O60826 627 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 PENKP01210 267 aaPredicted RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 RBP1P09455 135 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 HNRNPA1P09651 372 aaKnown RBP eCLIP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 PABPC1P11940 636 aaKnown RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 CD1DP15813 335 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 ZNF37AP17032 561 aaPredicted RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 XIAPP98170 497 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 KDSRQ06136 332 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 LRRC73Q5JTD7 316 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 ADGRG2Q8IZP9 1017 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 CCDC97Q96F63 343 aaPredicted RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 SLC30A3Q99726 388 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 SIKE1Q9BRV8 207 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 OSBPL1AQ9BXW6 950 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 ZFYVE1Q9HBF4 777 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 DNAJC28Q9NX36 388 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 NCKIPSDQ9NZQ3 722 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 FIS1Q9Y3D6 152 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 RAP2CQ9Y3L5 183 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 A0A0J9YYE9 177 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 IQCF5A8MTL0 148 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 HTRA2O43464 458 aaPredicted RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 NIPSNAP2O75323 286 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 TRBC1P01850 177 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 SERPINA6P08185 405 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 TSPAN8P19075 237 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 NCF2P19878 526 aaPredicted RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 HOXA9P31269 272 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 CA5AP35218 305 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 HMGCLP35914 325 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 PBX2P40425 430 aa18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 RPL14P50914 215 aaKnown RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 SNRPD1P62314 119 aaKnown RBP18.24■□□□□ 0.51
SDR39U1-220ENST00000556548 SETMARQ53H47 684 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms