RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 IQCB1Q15051 598 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 MANEAQ5SRI9 462 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 ZFAND4Q86XD8 727 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 NAGSQ8N159 534 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 PATE1Q8WXA2 126 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 SYN2Q92777 582 aaPredicted RBP18.76■□□□□ 0.59
CDKN3-209ENST00000556102 SCARF2Q96GP6 870 aaPredicted RBP18.76■□□□□ 0.59
CDKN3-209ENST00000556102 SEMA3CQ99985 751 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 NUDT22Q9BRQ3 303 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 NUP85Q9BW27 656 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 POLR1EQ9GZS1 481 aaKnown RBP18.76■□□□□ 0.59
CDKN3-209ENST00000556102 CDH19Q9H159 772 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 ABCG8Q9H221 673 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 PCDHB11Q9Y5F2 797 aa18.76■□□□□ 0.59
CDKN3-209ENST00000556102 SDK2Q58EX2 2172 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 A0A1W2PQJ5 194 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 HGSO14964 777 aaPredicted RBP18.75■□□□□ 0.59
CDKN3-209ENST00000556102 SOD1P00441 154 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 CYP1A2P05177 515 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 PDHA1P08559 390 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 ZNF30P17039 623 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 IL4RP24394 825 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 MMRN1Q13201 1228 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 TMEM164Q5U3C3 297 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 LRRC66Q68CR7 880 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 DOK6Q6PKX4 331 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 XKR5Q6UX68 686 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 ADAMTSL4Q6UY14 1074 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 ZNF574Q6ZN55 896 aaPredicted RBP18.75■□□□□ 0.59
CDKN3-209ENST00000556102 DTX1Q86Y01 620 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 FAM71BQ8TC56 605 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 AP2M1Q96CW1 435 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 OR2M4Q96R27 311 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 CD84Q9UIB8 345 aa18.75■□□□□ 0.59
CDKN3-209ENST00000556102 IGHV5-10-1A0A0J9YXX1 117 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 A0A0J9YYE9 177 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 A0A0U1RQS6 177 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 MFSD11O43934 449 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 TRBC1P01850 177 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 ITGB2P05107 769 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 PYGLP06737 847 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 CD1CP29017 333 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 GARSP41250 739 aaKnown RBP18.74■□□□□ 0.59
CDKN3-209ENST00000556102 ACTR1BP42025 376 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 ACTR1AP61163 376 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 ITKQ08881 620 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 GALNT2Q10471 571 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 TRA2AQ13595 282 aaKnown RBP eCLIP18.74■□□□□ 0.59
CDKN3-209ENST00000556102 HADHQ16836 314 aaKnown RBP18.74■□□□□ 0.59
CDKN3-209ENST00000556102 ALG1LQ6GMV1 187 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 RFLNAQ6ZTI6 216 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 ZNF765Q7L2R6 523 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 NLRP8Q86W28 1048 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 MAML1Q92585 1016 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 CCDC74BQ96LY2 380 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 PCDHGA4Q9Y5G9 962 aa18.74■□□□□ 0.59
CDKN3-209ENST00000556102 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.73■□□□□ 0.59
CDKN3-209ENST00000556102 MYO1FO00160 1098 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 SERPING1P05155 500 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 CD48P09326 243 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 CCL4P13236 92 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 CES1P23141 567 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 SSR1P43307 286 aaKnown RBP18.73■□□□□ 0.59
CDKN3-209ENST00000556102 ARSEP51690 589 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 LIMK2P53671 638 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 EPHB1P54762 984 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 PTSQ03393 145 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 PAFAH1B3Q15102 231 aaKnown RBP18.73■□□□□ 0.59
CDKN3-209ENST00000556102 LINC00303Q3SY05 128 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 CCDC122Q5T0U0 273 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 NCBP2-AS2Q69YL0 99 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 TIGD7Q6NT04 549 aaPredicted RBP18.73■□□□□ 0.59
CDKN3-209ENST00000556102 CAVIN1Q6NZI2 390 aaKnown RBP18.73■□□□□ 0.59
CDKN3-209ENST00000556102 VASH2Q86V25 355 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 EXD3Q8N9H8 876 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 RCBTB1Q8NDN9 531 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 SCAMP4Q969E2 229 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 SMIM14Q96QK8 99 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 AMACRQ9UHK6 382 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 DNPEPQ9ULA0 475 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 TMEM98Q9Y2Y6 226 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 PLEKHM1Q9Y4G2 1056 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 SPTA1P02549 2419 aa18.73■□□□□ 0.59
CDKN3-209ENST00000556102 IGHV1OR21-1A0A087WYE8 117 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 A0A087X0T9 212 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 MATN3O15232 486 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 PPM1DO15297 605 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 FAM228BP0C875 321 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 PBX1P40424 430 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 STC1P52823 247 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 ZBED6P86452 979 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 DSC2Q02487 901 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 SQSTM1Q13501 440 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 DPYSL3Q14195 570 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 IFI16Q16666 785 aaKnown RBP18.72■□□□□ 0.59
CDKN3-209ENST00000556102 PYCR3Q53H96 274 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 ALKBH5Q6P6C2 394 aaKnown RBP18.72■□□□□ 0.59
CDKN3-209ENST00000556102 TRIM74Q86UV6 250 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 NRSN1Q8IZ57 195 aa18.72■□□□□ 0.59
CDKN3-209ENST00000556102 ZSCAN1Q8NBB4 408 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms