RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 VWA7Q9Y334 891 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SH3BP1Q9Y3L3 701 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 RAI2Q9Y5P3 530 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 CAPN7Q9Y6W3 813 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SHROOM3Q8TF72 1996 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CCDC162PA2VCL2 907 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 C2orf81A6NN90 581 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ANKRD66B4E2M5 251 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 H7C0S8 307 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 LEFTY2O00292 366 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CD3EAPO15446 510 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 FZD6O60353 706 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CCDC22O60826 627 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 RASSF9O75901 435 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TMCC1O94876 653 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 PAPLNO95428 1278 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 GLP2RO95838 553 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TOP3BO95985 862 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 PENKP01210 267 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CKMP06732 381 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 MYL4P12829 197 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CD9P21926 228 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 GLDCP23378 1020 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 MZF1P28698 734 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 SERPINB5P36952 375 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CSKP41240 450 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 RGRP47804 291 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 RASSF2P50749 326 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 SCNN1BP51168 640 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 SUOXP51687 545 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ZNF140P52738 457 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 SLC12A2P55011 1212 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 DNAJB13P59910 316 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 C1QTNF8P60827 252 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ABCE1P61221 599 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 NCALDP61601 193 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 PRAMEP78395 509 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ASPHQ12797 758 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 SF3A3Q12874 501 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 OVGP1Q12889 678 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CDH18Q13634 790 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 DLG2Q15700 870 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TYSND1Q2T9J0 566 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 HSF5Q4G112 596 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CNSTQ6PJW8 725 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 RAPH1Q70E73 1250 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CLNKQ7Z7G1 428 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 SLC41A1Q8IVJ1 513 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CEP97Q8IW35 865 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 WDR75Q8IWA0 830 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 C10orf67Q8IYJ2 551 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CENPLQ8N0S6 344 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CARNMT1Q8N4J0 409 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 MAB21L3Q8N8X9 362 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ZNF557Q8N988 423 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TDRD5Q8NAT2 981 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 OR6P1Q8NGX9 317 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 PIWIL2Q8TC59 973 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 PPP4R1Q8TF05 950 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 PDCD6IPQ8WUM4 868 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 INPP5DQ92835 1189 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 COL26A1Q96A83 441 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ISG20Q96AZ6 181 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 SKA1Q96BD8 255 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ERP27Q96DN0 273 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CDKN2AIPNLQ96HQ2 116 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 UBXN10Q96LJ8 280 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TBATAQ96M53 351 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 NSMCE3Q96MG7 304 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TMEM237Q96Q45 408 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TMEM120AQ9BXJ8 343 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 WWP1Q9H0M0 922 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 MTIF3Q9H2K0 278 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TASP1Q9H6P5 420 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ECT2Q9H8V3 914 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 SRA1Q9HD15 236 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 ARHGEF3Q9NR81 526 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 TLR9Q9NR96 1032 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 INTS10Q9NVR2 710 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 HEY2Q9UBP5 337 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 DPP7Q9UHL4 492 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 VPS51Q9UID3 782 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 DCTN4Q9UJW0 460 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 VPS28Q9UK41 221 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 RUVBL2Q9Y230 463 aaKnown RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-235ENST00000556082 CEP350Q5VT06 3117 aa8.3□□□□□ -1.08
ATXN3-235ENST00000556082 A0A0G2JND7 137 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 CCDC189A1A4V9 331 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 CCDC78A2IDD5 438 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 LINC01553A4QN01 128 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 HIDE1A8MVS5 230 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 PHGDHO43175 533 aaKnown RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ITM2AO43736 263 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SNAP91O60641 907 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SOCS5O75159 536 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms