RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	TMEM198	Q66K66	360 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ARPIN	Q7Z6K5	226 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	TMEM135	Q86UB9	458 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	FCRL2	Q96LA5	508 aa	Predicted RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	VAT1	Q99536	393 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	XPR1	Q9UBH6	696 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	AAR2	Q9Y312	384 aa	Known RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	CIT	O14578	2027 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ZCWPW2	A0A1B0GU75	182 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	DCLK1	O15075	740 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	GLP2R	O95838	553 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ZNF37A	P17032	561 aa	Predicted RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ACLY	P53396	1101 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ST8SIA6	P61647	398 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	CYP4F2	P78329	520 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	CYP4F3	Q08477	520 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	STARD3	Q14849	445 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	PSMD5	Q16401	504 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	PFKFB4	Q16877	469 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	RDH11	Q8TC12	318 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	RNFT2	Q96EX2	444 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	SERPINB11	Q96P15	392 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	OSBPL10	Q9BXB5	764 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	RHOJ	Q9H4E5	214 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	POLR1B	Q9H9Y6	1135 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ENTPD7	Q9NQZ7	604 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ABCB10	Q9NRK6	738 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	MRPS7	Q9Y2R9	242 aa	Known RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	PARP14	Q460N5	1801 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ANKRD12	Q6UB98	2062 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	PRKAA2	P54646	552 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	RAB14	P61106	215 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	SOX4	Q06945	474 aa	Predicted RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	TRIP4	Q15650	581 aa	Predicted RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ZFAND2B	Q8WV99	257 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	CAPSL	Q8WWF8	208 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	TRIB2	Q92519	343 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	MRPS31	Q92665	395 aa	Known RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	NDN	Q99608	321 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	UBE2O	Q9C0C9	1292 aa	Known RBP	12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ADAMTS10	Q9H324	1103 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	ABCC13	Q9NSE7	274 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	RRN3	Q9NYV6	651 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	RAD54B	Q9Y620	910 aa		12.28	□□□□□ -0.44
TMPO-212	ENST00000556029	CEP290	O15078	2479 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029		C9JVG2	144 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	HOXA2	O43364	376 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	PRKCG	P05129	697 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	LRPAP1	P30533	357 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	RPL9	P32969	192 aa	Known RBP	12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	THOP1	P52888	689 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	OXCT1	P55809	520 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	DCTN2	Q13561	401 aa	Known RBP	12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	ZNF460	Q14592	562 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	AP5B1	Q2VPB7	878 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	DCLRE1A	Q6PJP8	1040 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	ZNF621	Q6ZSS3	439 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	SLC24A5	Q71RS6	500 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	MLPH	Q9BV36	600 aa	Predicted RBP	12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	DPY30	Q9C005	99 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	SLC7A5P2	Q9GIP4	190 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	HIPK3	Q9H422	1215 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	GTF2IRD1	Q9UHL9	959 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	TMCC3	Q9ULS5	477 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029	PADI4	Q9UM07	663 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029		U3KQV3	271 aa		12.27	□□□□□ -0.44
TMPO-212	ENST00000556029		A0A1W2PQH9	124 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	MATN2	O00339	956 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	ZNF195	O14628	629 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	SEC22B	O75396	215 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	RPLP2	P05387	115 aa	Known RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	RBP1	P09455	135 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	BOP1	Q14137	746 aa	Known RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	POLD3	Q15054	466 aa	Predicted RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	GPR107	Q5VW38	600 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	ZFP1	Q6P2D0	407 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	RBM44	Q6ZP01	1051 aa	Known RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	TPGS1	Q6ZTW0	290 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	FSTL5	Q8N475	847 aa	Predicted RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	ACVR1C	Q8NER5	493 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	RGS18	Q9NS28	235 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	FBXW11	Q9UKB1	542 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	XRCC1	P18887	633 aa	Predicted RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	WARS	P23381	471 aa	Known RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	AIF1	P55008	147 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	SRP54	P61011	504 aa	Known RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	HPCA	P84074	193 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	HNRNPD	Q14103	355 aa	Known RBP	12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	FBXO48	Q5FWF7	155 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	ATG14	Q6ZNE5	492 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	SATL1	Q86VE3	508 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	LPCAT1	Q8NF37	534 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	SPATA22	Q8NHS9	363 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	MS4A4A	Q96JQ5	239 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	BTBD9	Q96Q07	612 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	SLC9A7	Q96T83	725 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	NPAS2	Q99743	824 aa		12.27	□□□□□ -0.45
TMPO-212	ENST00000556029	TBL1Y	Q9BQ87	522 aa		12.27	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms