RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TEKT5Q96M29 485 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 KCNK9Q9NPC2 374 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 FZD3Q9NPG1 666 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 PSMC3IPQ9P2W1 217 aaPredicted RBP9.89□□□□□ -0.83
PSEN1-213ENST00000555386 CTNNAL1Q9UBT7 734 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 GMEB2Q9UKD1 530 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 COQ6Q9Y2Z9 468 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 FADS3Q9Y5Q0 445 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 TP53BP1Q12888 1972 aaPredicted RBP9.88□□□□□ -0.83
PSEN1-213ENST00000555386 BCLAF3A2AJT9 711 aaKnown RBP9.88□□□□□ -0.83
PSEN1-213ENST00000555386 IGLON5A6NGN9 336 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SLC31A1O15431 190 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 MMP20O60882 483 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SPAG6O75602 509 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 DNAJC8O75937 253 aaPredicted RBP9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SUN1O94901 812 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SLC4A1P02730 911 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 CFIP05156 583 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 MMP2P08253 660 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 ALPIP09923 528 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 PIRTP0C851 137 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 PSMB4P28070 264 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 GCAP28676 217 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SPEM2Q0P670 501 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 TMED2Q15363 201 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 UGP2Q16851 508 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 ANKRD20A2Q5SQ80 823 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 ANKRD20A1Q5TYW2 823 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 ANKRD20A3Q5VUR7 823 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 ERAP2Q6P179 960 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 BRAT1Q6PJG6 821 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 LAYNQ6UX15 382 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 RGS9BPQ6ZS82 235 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 ASCL5Q7RTU5 278 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 PRPF39Q86UA1 669 aaKnown RBP9.88□□□□□ -0.83
PSEN1-213ENST00000555386 PACS2Q86VP3 889 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SRRM1Q8IYB3 904 aaKnown RBP9.88□□□□□ -0.83
PSEN1-213ENST00000555386 CYP4X1Q8N118 509 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 PDIK1LQ8N165 341 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SLC25A41Q8N5S1 370 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SUMF1Q8NBK3 374 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 IPMKQ8NFU5 416 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 CXorf40AQ8TE69 158 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 PYROXD1Q8WU10 500 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 RMDN1Q96DB5 314 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 RTP4Q96DX8 246 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 IFT43Q96FT9 208 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SLC25A51Q9H1U9 297 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 VPS37BQ9H9H4 285 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 USP29Q9HBJ7 922 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 FSCN3Q9NQT6 498 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 CA5BQ9Y2D0 317 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 SLCO1B1Q9Y6L6 691 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 CFAP54Q96N23 3096 aa9.88□□□□□ -0.83
PSEN1-213ENST00000555386 CABIN1Q9Y6J0 2220 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 METTL12A8MUP2 240 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 PATE3B3GLJ2 98 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 TCP11X1B4DZS4 312 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 TRAFD1O14545 582 aaPredicted RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 SLC7A4O43246 635 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 SPINT1O43278 529 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 SOCS5O75159 536 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 PGLSO95336 258 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 IGHV4-34P06331 123 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 POLR2LP62875 67 aaKnown RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 SPARCL1Q14515 664 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 WDR45BQ5MNZ6 344 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 ITPRIPL1Q6GPH6 555 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 LAIR1Q6GTX8 287 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 HORMAD1Q86X24 394 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 FOXJ1Q92949 421 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 ALKBH8Q96BT7 664 aaKnown RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 IMP4Q96G21 291 aaKnown RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 OXNAD1Q96HP4 312 aaPredicted RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 FEM1CQ96JP0 617 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 SERAC1Q96JX3 654 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 ZC3H10Q96K80 434 aaKnown RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 SPATA13Q96N96 652 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 SMC6Q96SB8 1091 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 ELAC2Q9BQ52 826 aaKnown RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 APOL2Q9BQE5 337 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 DHRS4Q9BTZ2 278 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 TDRD1Q9BXT4 1180 aaKnown RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 TRABDQ9H4I3 376 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 ACSS3Q9H6R3 686 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 PREBQ9HCU5 417 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 AASDHPPTQ9NRN7 309 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 TMEM74BQ9NUR3 256 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 PAK5Q9P286 719 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 DKK3Q9UBP4 350 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 TBK1Q9UHD2 729 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 TRHDEQ9UKU6 1024 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 ZFR2Q9UPR6 939 aaKnown RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.87□□□□□ -0.83
PSEN1-213ENST00000555386 CACNA1EQ15878 2313 aa9.87□□□□□ -0.83
PSEN1-213ENST00000555386 TMEM131Q92545 1883 aa9.86□□□□□ -0.83
PSEN1-213ENST00000555386 HTRA2O43464 458 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-213ENST00000555386 LZTS3O60299 673 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-213ENST00000555386 GFRA3O60609 400 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms