RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 PCDH20Q8N6Y1 951 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 C12orf76Q8N812 135 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 ZNF557Q8N988 423 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 OR2A12Q8NGT7 310 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 OR6K2Q8NGY2 324 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 GDPD5Q8WTR4 605 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 PTERQ96BW5 349 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 RPL10LQ96L21 214 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 SH3GL3Q99963 347 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 MRPL57Q9BQC6 102 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 GATA5Q9BWX5 397 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 BBS2Q9BXC9 721 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 DNAJC28Q9NX36 388 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 GALPQ9UBC7 116 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 DPP7Q9UHL4 492 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 ERVW-1Q9UQF0 538 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 OTOL1A6NHN0 477 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 DCTN3O75935 186 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 LTA4HP09960 611 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 TROVE2P10155 538 aaKnown RBP eCLIP8.88□□□□□ -0.99
TDP1-210ENST00000554976 NEFHP12036 1026 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 HOXB8P17481 243 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 KCNA5P22460 613 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 MC4RP32245 332 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 NRIP1P48552 1158 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 MESP2Q0VG99 397 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CBX2Q14781 532 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 ACAP2Q15057 778 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 DHCR24Q15392 516 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CARD16Q5EG05 197 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 MRNIPQ6NTE8 343 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CLNKQ7Z7G1 428 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 SPATA6LQ8N4H0 392 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 OR6P1Q8NGX9 317 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 CDCA3Q99618 268 aaPredicted RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 SLC30A3Q99726 388 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 STN1Q9H668 368 aaKnown RBP8.88□□□□□ -0.99
TDP1-210ENST00000554976 OBP2AQ9NY56 170 aa8.88□□□□□ -0.99
TDP1-210ENST00000554976 NPIPB15A6NHN6 443 aaPredicted RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 H3BMM5 538 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 TRIM13O60858 407 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 CTSLP07711 333 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 MYL2P10916 166 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 CTPS1P17812 591 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 LHCGRP22888 699 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 ECT2LQ008S8 904 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 BCL2L1Q07817 233 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 ZNF513Q8N8E2 541 aaPredicted RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 GBP7Q8N8V2 638 aaPredicted RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 PIWIL2Q8TC59 973 aaKnown RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 SLC7A6OSQ96CW6 309 aaPredicted RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 MOCOSQ96EN8 888 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 EBF4Q9BQW3 602 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 CCDC106Q9BWC9 280 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 MRPL46Q9H2W6 279 aaKnown RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 TLK1Q9UKI8 766 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 CRYL1Q9Y2S2 319 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 WASF2Q9Y6W5 498 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 CKAP5Q14008 2032 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 GPR39O43194 453 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 KLK8O60259 260 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 UNC5CO95185 931 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 ATP5BP06576 529 aaKnown RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 RPS3P23396 243 aaKnown RBP eCLIP8.87□□□□□ -0.99
TDP1-210ENST00000554976 CCR10P46092 362 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 SULT2A1Q06520 285 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 CRTC1Q6UUV9 634 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 DPY19L3Q6ZPD9 716 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 RAPH1Q70E73 1250 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 GPR149Q86SP6 731 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 ZNF781Q8N8C0 355 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 CHST14Q8NCH0 376 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 GABPB2Q8TAK5 448 aaPredicted RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 SMG7Q92540 1137 aaKnown RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 L3HYPDHQ96EM0 354 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 SCRN2Q96FV2 425 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 ZNF641Q96N77 438 aaPredicted RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 ATOH8Q96SQ7 321 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 FAM83CQ9BQN1 747 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 ATP13A3Q9H7F0 1226 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 BPIFA1Q9NP55 256 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 PNPOQ9NVS9 261 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 SLCO3A1Q9UIG8 710 aa8.87□□□□□ -0.99
TDP1-210ENST00000554976 MRPS23Q9Y3D9 190 aaKnown RBP8.87□□□□□ -0.99
TDP1-210ENST00000554976 A8MT66 165 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 OR1I1O60431 355 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 NPHS1O60500 1241 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 KIAA0754O94854 1291 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 C1SP09871 688 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 MTHFD2P13995 350 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 BPIP17213 487 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SP100P23497 879 aaPredicted RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 PAX7P23759 505 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 GLRBP48167 497 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CLCN7P51798 805 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CCNHP51946 323 aaPredicted RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 ARFIP2P53365 341 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SNRPD1P62314 119 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 PTSQ03393 145 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms