RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ADGRG7Q96K78 797 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 HARBI1Q96MB7 349 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 WDFY2Q96P53 400 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 SLCO5A1Q9H2Y9 848 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 POLR1BQ9H9Y6 1135 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 KRT84Q9NSB2 600 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 EHD2Q9NZN4 543 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 MALT1Q9UDY8 824 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 TINAGQ9UJW2 476 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-211ENST00000554437 BTBD18B2RXH4 712 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 KDM4BO94953 1096 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 MLYCDO95822 493 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 CCKBRP32239 447 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 ARL3P36405 182 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 TERF1P54274 439 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 DLG1Q12959 904 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 OASLQ15646 514 aaKnown RBP5.06□□□□□ -1.6
SCFD1-211ENST00000554437 KRT24Q2M2I5 525 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 SETMARQ53H47 684 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-211ENST00000554437 KCTD18Q6PI47 426 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-211ENST00000554437 ARMC9Q7Z3E5 817 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 KRT77Q7Z794 578 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 ADSSL1Q8N142 457 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 OR14L1PQ8NHC6 308 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 WFIKKN2Q8TEU8 576 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 ARHGEF2Q92974 986 aaKnown RBP5.06□□□□□ -1.6
SCFD1-211ENST00000554437 PCGF1Q9BSM1 259 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 MMP25Q9NPA2 562 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 MAU2Q9Y6X3 613 aa5.06□□□□□ -1.6
SCFD1-211ENST00000554437 A0A1W2PQF6 199 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 PLSCR5A0PG75 271 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 USO1O60763 962 aaKnown RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 SLC25A12O75746 678 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 PPP1R3DO95685 299 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 AFPP02771 609 aaKnown RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 EIF2S1P05198 315 aaKnown RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 BDKRB2P30411 391 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 HNRNPH2P55795 449 aaKnown RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 NUCB1Q02818 461 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 SNTA1Q13424 505 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 C9orf57Q5W0N0 161 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 RGMBQ6NW40 437 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 CCNI2Q6ZMN8 369 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 TBC1D1Q86TI0 1168 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 NGEFQ8N5V2 710 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 TANKQ92844 425 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 IGSF8Q969P0 613 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 RRNAD1Q96FB5 475 aaKnown RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 C1QTNF4Q9BXJ3 329 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 GAREM1Q9H706 876 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 RANGRFQ9HD47 186 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-211ENST00000554437 RRP7BPQ9NSQ0 103 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 SMARCAL1Q9NZC9 954 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 ADAM18Q9Y3Q7 739 aa5.05□□□□□ -1.6
SCFD1-211ENST00000554437 RPGRIP1LQ68CZ1 1315 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 PGPEP1LA6NFU8 196 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 F5H0A9 414 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-211ENST00000554437 TIPRLO75663 272 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 RFPL2O75678 378 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 PMS2P2O95744 297 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 DDX58O95786 925 aaKnown RBP5.04□□□□□ -1.6
SCFD1-211ENST00000554437 RXRGP48443 463 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 NIPAL4Q0D2K0 466 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 ZNF155Q12901 538 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-211ENST00000554437 MAMLD1Q13495 774 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 TNFAIP1Q13829 316 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 ALDH1L2Q3SY69 923 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 FAM133BQ5BKY9 247 aaKnown RBP5.04□□□□□ -1.6
SCFD1-211ENST00000554437 SNX30Q5VWJ9 437 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 DUS1LQ6P1R4 473 aaKnown RBP5.04□□□□□ -1.6
SCFD1-211ENST00000554437 FAM122CQ6P4D5 195 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 NCEH1Q6PIU2 408 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCFD1-211ENST00000554437 C1orf122Q6ZSJ8 110 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 DPPA4Q7L190 304 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 ARHGAP12Q8IWW6 846 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 ANKRD52Q8NB46 1076 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 SMRP1Q8NCR6 262 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 ARHGEF26Q96DR7 871 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 PPP1R13BQ96KQ4 1090 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 DUX5Q96PT3 197 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 ACOX2Q99424 681 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 MUC13Q9H3R2 512 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 ZNF224Q9NZL3 707 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 SIX4Q9UIU6 781 aa5.04□□□□□ -1.6
SCFD1-211ENST00000554437 CORO1CQ9ULV4 474 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-211ENST00000554437 ITIH6Q6UXX5 1313 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 SAA2-SAA4A0A096LPE2 208 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 C1orf226A1L170 272 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 DENND3A2RUS2 1198 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 PI4KAP2A4QPH2 592 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 MAGEA13PA6NCF6 341 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 A6NCN8 305 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 LIPT2A6NK58 231 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 CLGNO14967 610 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 BAIAP3O94812 1187 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 SCGB1D1O95968 90 aa5.03□□□□□ -1.6
SCFD1-211ENST00000554437 EGFP01133 1207 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms