RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 WDR26Q9H7D7 661 aa11.54□□□□□ -0.56
TUBB3-204ENST00000554116 ATP13A3Q9H7F0 1226 aa11.54□□□□□ -0.56
TUBB3-204ENST00000554116 CATSPERBQ9H7T0 1116 aa11.54□□□□□ -0.56
TUBB3-204ENST00000554116 CARS2Q9HA77 564 aaKnown RBP11.54□□□□□ -0.56
TUBB3-204ENST00000554116 MRPL47Q9HD33 250 aaKnown RBP11.54□□□□□ -0.56
TUBB3-204ENST00000554116 PDP2Q9P2J9 529 aa11.54□□□□□ -0.56
TUBB3-204ENST00000554116 PCSK1NQ9UHG2 260 aa11.54□□□□□ -0.56
TUBB3-204ENST00000554116 SUFUQ9UMX1 484 aa11.54□□□□□ -0.56
TUBB3-204ENST00000554116 PCDHB11Q9Y5F2 797 aa11.54□□□□□ -0.56
TUBB3-204ENST00000554116 PCYT1BQ9Y5K3 369 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-204ENST00000554116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.54□□□□□ -0.56
TUBB3-204ENST00000554116 SCINQ9Y6U3 715 aa11.54□□□□□ -0.56
TUBB3-204ENST00000554116 FGF10O15520 208 aaPredicted RBP11.53□□□□□ -0.56
TUBB3-204ENST00000554116 NKX2-8O15522 239 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 CBFA2T2O43439 604 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 DUX1O43812 170 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 PALMO75781 387 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 GYPCP04921 128 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 MYCLP1P12525 358 aaPredicted RBP11.53□□□□□ -0.56
TUBB3-204ENST00000554116 KELP23276 732 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 SERPINA4P29622 427 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 CASP14P31944 242 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 ADCY8P40145 1251 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 POLE2P56282 527 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 FOXK1P85037 733 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 BCL2L1Q07817 233 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 SLC10A7Q0GE19 358 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 KCNAB2Q13303 367 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 ERMARDQ5T6L9 678 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 BORAQ6PGQ7 559 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 TIPARPQ7Z3E1 657 aaKnown RBP11.53□□□□□ -0.56
TUBB3-204ENST00000554116 HEATR4Q86WZ0 1026 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 ART4Q93070 314 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 PSKH2Q96QS6 385 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 CDH19Q9H159 772 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 SUDS3Q9H7L9 328 aaPredicted RBP11.53□□□□□ -0.56
TUBB3-204ENST00000554116 TRNAU1APQ9NX07 287 aaKnown RBP11.53□□□□□ -0.56
TUBB3-204ENST00000554116 MOSPD1Q9UJG1 213 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 PILRAQ9UKJ1 303 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 SLC17A4Q9Y2C5 497 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 PCDHGC4Q9Y5F7 938 aa11.53□□□□□ -0.56
TUBB3-204ENST00000554116 CSMD1Q96PZ7 3565 aa11.52□□□□□ -0.56
TUBB3-204ENST00000554116 PRPSAP2O60256 369 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 HEXIM1O94992 359 aaKnown RBP11.52□□□□□ -0.57
TUBB3-204ENST00000554116 ERCC2P18074 760 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 ETV3P41162 512 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 GPR3P46089 330 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 GNPDA1P46926 289 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 SCNN1BP51168 640 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 TPI1P60174 286 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 CDK3Q00526 305 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 ACOX1Q15067 660 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 CLPPQ16740 277 aaPredicted RBP11.52□□□□□ -0.57
TUBB3-204ENST00000554116 SLC30A9Q6PML9 568 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 Q6ZVL8 140 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 TECPR1Q7Z6L1 1165 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 TSPAN33Q86UF1 283 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 OR4D9Q8NGE8 314 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 KIAA1524Q8TCG1 905 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 FNIP1Q8TF40 1166 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 DTD2Q96FN9 168 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 SNRNP25Q9BV90 132 aaKnown RBP11.52□□□□□ -0.57
TUBB3-204ENST00000554116 THAP2Q9H0W7 228 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 DHX35Q9H5Z1 703 aaKnown RBP11.52□□□□□ -0.57
TUBB3-204ENST00000554116 ETNK2Q9NVF9 386 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 TUBD1Q9UJT1 453 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 AP4E1Q9UPM8 1137 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 MAN2B2Q9Y2E5 1009 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 CREBBPQ92793 2442 aa11.52□□□□□ -0.57
TUBB3-204ENST00000554116 A0A087X0T9 212 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 LOC101059948A0A1B0GTJ6 334 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 NPIPB15A6NHN6 443 aaPredicted RBP11.51□□□□□ -0.57
TUBB3-204ENST00000554116 ARHGAP42A6NI28 874 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 RHPN2P1A8MT19 583 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 B4E171 279 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 DAPK3O43293 454 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 RAD1O60671 282 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 FAM228BP0C875 321 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 MIPP30301 263 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 HTR7P34969 479 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 CASRP41180 1078 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 TSPAN7P41732 249 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 IL10RBQ08334 325 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 TRAF2Q12933 501 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 TRA2AQ13595 282 aaKnown RBP eCLIP11.51□□□□□ -0.57
TUBB3-204ENST00000554116 DPYSQ14117 519 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 C4orf17Q53FE4 359 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 CCDC122Q5T0U0 273 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 CFAP58Q5T655 872 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 TMEM164Q5U3C3 297 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 ANKS6Q68DC2 871 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 ALKBH5Q6P6C2 394 aaKnown RBP11.51□□□□□ -0.57
TUBB3-204ENST00000554116 ARHGAP22Q7Z5H3 698 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 ZNF761Q86XN6 746 aaPredicted RBP11.51□□□□□ -0.57
TUBB3-204ENST00000554116 CACNA2D3Q8IZS8 1091 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 FAM26EQ8N5C1 309 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 RTP4Q96DX8 246 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 NUS1Q96E22 293 aa11.51□□□□□ -0.57
TUBB3-204ENST00000554116 SLC45A3Q96JT2 553 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms