RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 MBNL1Q9NR56 388 aaKnown RBP6.92□□□□□ -1.3
ATXN3-224ENST00000554040 DONSONQ9NYP3 566 aa6.92□□□□□ -1.3
ATXN3-224ENST00000554040 LRIT1Q9P2V4 623 aa6.92□□□□□ -1.3
ATXN3-224ENST00000554040 VPS51Q9UID3 782 aa6.92□□□□□ -1.3
ATXN3-224ENST00000554040 PILRAQ9UKJ1 303 aa6.92□□□□□ -1.3
ATXN3-224ENST00000554040 TRAF3IP3Q9Y228 551 aa6.92□□□□□ -1.3
ATXN3-224ENST00000554040 SPG11Q96JI7 2443 aa6.92□□□□□ -1.3
ATXN3-224ENST00000554040 HIVEP1P15822 2718 aa6.92□□□□□ -1.3
ATXN3-224ENST00000554040 POLEQ07864 2286 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 IGHV5-10-1A0A0J9YXX1 117 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 LOC101059948A0A1B0GTJ6 334 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 ANKRD33BA6NCL7 494 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 C16orf96A6NNT2 1141 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 MKRN2OSH3BPM6 223 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 NUDT21O43809 227 aaKnown RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 KLRC4O43908 158 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 ENDOD1O94919 500 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 TRUB2O95900 331 aaKnown RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 SLC2A3P11169 496 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 PDCP20941 246 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 TPP2P29144 1249 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 RPL34P49207 117 aaKnown RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 HK2P52789 917 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CDH4P55283 916 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 TRA2AQ13595 282 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CUL2Q13617 745 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CUL4BQ13620 913 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 HLTFQ14527 1009 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 TCEA2Q15560 299 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 NFIL3Q16649 462 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CLPPQ16740 277 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 ALG11Q2TAA5 492 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 EIF2S3LQ2VIR3 472 aaKnown RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 EDRF1Q3B7T1 1238 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 AMZ1Q400G9 498 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 C5orf22Q49AR2 442 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 MAP9Q49MG5 647 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CARD16Q5EG05 197 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 C22orf39Q6P5X5 142 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 ENPP7Q6UWV6 458 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 RD3Q7Z3Z2 195 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 VPS36Q86VN1 386 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CREG2Q8IUH2 290 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CCDC13Q8IYE1 715 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 FAM186BQ8IYM0 893 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 NLGN4XQ8N0W4 816 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 SLC34A3Q8N130 599 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CCDC112Q8NEF3 446 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 NLGN4YQ8NFZ3 816 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 TFAP2BQ92481 460 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 ART4Q93070 314 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 KIAA1143Q96AT1 154 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 FAM149B1Q96BN6 582 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 USP28Q96RU2 1077 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 ASPSCR1Q9BZE9 553 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 SPRY4Q9C004 299 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 RDH14Q9HBH5 336 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 SLC39A1Q9NY26 324 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 KCTD3Q9Y597 815 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-224ENST00000554040 CSMD2Q7Z408 3487 aa6.91□□□□□ -1.3
ATXN3-224ENST00000554040 A0A0D9SEW6 157 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 FAM221AA4D161 298 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 B4E171 279 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 M0QYV0 167 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 POLR2DO15514 142 aaKnown RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 TM7SF2O76062 418 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 TNFP01375 233 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 RHOCP08134 193 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 PAEPP09466 180 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 MED14OSP0DP75 135 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 TCN2P20062 427 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 NR2F2P24468 414 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 HTR1BP28222 390 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 CCR1P32246 355 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 CSTF2P33240 577 aaKnown RBP eCLIP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 TRHRP34981 398 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 PSMC2P35998 433 aaKnown RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 TSPAN7P41732 249 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 NASPP49321 788 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 ST13P50502 369 aaKnown RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 MXI1P50539 228 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 DNA2P51530 1060 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 COPB1P53618 953 aaKnown RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 LIMK2P53671 638 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 OR1D5P58170 312 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 SRP54P61011 504 aaKnown RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 YWHAEP62258 255 aaKnown RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 PITX1P78337 314 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 SLC20A2Q08357 652 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 ABHD18Q0P651 414 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 STILQ15468 1287 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 C14orf28Q4W4Y0 310 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 TMEM201Q5SNT2 666 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 DCAF12Q5T6F0 453 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 ATP1A1-AS1Q5TC04 95 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 LINGO4Q6UY18 593 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 BNC2Q6ZN30 1099 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-224ENST00000554040 SFTPA2Q8IWL1 248 aa6.9□□□□□ -1.3
ATXN3-224ENST00000554040 UNC5BQ8IZJ1 945 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms