RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 AGAP2Q99490 1192 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 TBL1YQ9BQ87 522 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 SMARCAL1Q9NZC9 954 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 DNAH14Q0VDD8 3507 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 CNOT1A5YKK6 2376 aaKnown RBP22.74■■□□□ 1.23
TDP1-206ENST00000553569 TMEM202A6NGA9 273 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 SCAMP1O15126 338 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 CBFA2T3O75081 653 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 SOD1P00441 154 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 MYCLP1P12525 358 aaPredicted RBP22.73■■□□□ 1.23
TDP1-206ENST00000553569 ETS1P14921 441 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 ADRA1AP35348 466 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 ACTN2P35609 894 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 CDK3Q00526 305 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 TCEA2Q15560 299 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 KCTD16Q68DU8 428 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 RD3Q7Z3Z2 195 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 GLT6D1Q7Z4J2 308 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 TMC3Q7Z5M5 1100 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 ZNF548Q8NEK5 533 aaPredicted RBP22.73■■□□□ 1.23
TDP1-206ENST00000553569 LMX1AQ8TE12 382 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 LRRC45Q96CN5 670 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 PDXPQ96GD0 296 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 SLC13A1Q9BZW2 595 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 FAM83DQ9H4H8 585 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 MOSPD1Q9UJG1 213 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 SNX12Q9UMY4 172 aa22.73■■□□□ 1.23
TDP1-206ENST00000553569 PCNX2A6NKB5 2137 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 KELP23276 732 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 KCNJ1P48048 391 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 SRP54P61011 504 aaKnown RBP22.72■■□□□ 1.23
TDP1-206ENST00000553569 SIM1P81133 766 aaPredicted RBP22.72■■□□□ 1.23
TDP1-206ENST00000553569 PRRT3Q5FWE3 981 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 DRICH1Q6PGQ1 229 aaPredicted RBP22.72■■□□□ 1.23
TDP1-206ENST00000553569 DOK6Q6PKX4 331 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 GSTA5Q7RTV2 222 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 TRIM74Q86UV6 250 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 RAVER1Q8IY67 606 aaKnown RBP22.72■■□□□ 1.23
TDP1-206ENST00000553569 C17orf53Q8N3J3 647 aaPredicted RBP22.72■■□□□ 1.23
TDP1-206ENST00000553569 SLC25A45Q8N413 288 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 PRELID2Q8N945 189 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 GLIS1Q8NBF1 620 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 OR56A4Q8NGH8 313 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 BTN2A2Q8WVV5 523 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 OR1E3Q8WZA6 343 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 WDR24Q96S15 920 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 AP1M1Q9BXS5 423 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 TEX101Q9BY14 249 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 TRABDQ9H4I3 376 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 SUDS3Q9H7L9 328 aaPredicted RBP22.72■■□□□ 1.23
TDP1-206ENST00000553569 FGF22Q9HCT0 170 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 BPIFA1Q9NP55 256 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 MRPL40Q9NQ50 206 aaKnown RBP22.72■■□□□ 1.23
TDP1-206ENST00000553569 HACD3Q9P035 362 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 FTSJ1Q9UET6 329 aa22.72■■□□□ 1.23
TDP1-206ENST00000553569 RGSL1A5PLK6 1076 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 PGRMC1O00264 195 aaKnown RBP22.71■■□□□ 1.23
TDP1-206ENST00000553569 ZNF185O15231 689 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 INPP4BO15327 924 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 RASGRP1O95267 797 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 HOXC4P09017 264 aaPredicted RBP22.71■■□□□ 1.23
TDP1-206ENST00000553569 ZSCAN5DPP0CG00 497 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 TEAD1P28347 426 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 C1orf61Q13536 156 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 TRIP6Q15654 476 aaKnown RBP22.71■■□□□ 1.23
TDP1-206ENST00000553569 HENMT1Q5T8I9 393 aaKnown RBP22.71■■□□□ 1.23
TDP1-206ENST00000553569 KCTD11Q693B1 232 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 ADAMTSL4Q6UY14 1074 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 RANBP10Q6VN20 620 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 KLHDC8BQ8IXV7 354 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 TTC30BQ8N4P2 665 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 PDCD7Q8N8D1 485 aaKnown RBP22.71■■□□□ 1.23
TDP1-206ENST00000553569 GPR26Q8NDV2 337 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 BAHD1Q8TBE0 780 aaPredicted RBP22.71■■□□□ 1.23
TDP1-206ENST00000553569 CDC6Q99741 560 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 LRRC61Q9BV99 259 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 LRRC40Q9H9A6 602 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 HOMER3Q9NSC5 361 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 SPASTQ9UBP0 616 aa22.71■■□□□ 1.23
TDP1-206ENST00000553569 MYLKQ15746 1914 aa22.7■■□□□ 1.23
TDP1-206ENST00000553569 PDE2AO00408 941 aaPredicted RBP22.7■■□□□ 1.22
TDP1-206ENST00000553569 AQP9O43315 295 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 BUD23O43709 281 aaKnown RBP22.7■■□□□ 1.22
TDP1-206ENST00000553569 PYGLP06737 847 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 BPIP17213 487 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 BLKP51451 505 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 HK3P52790 923 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 NLRP8Q86W28 1048 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 NAP1L3Q99457 506 aaPredicted RBP22.7■■□□□ 1.22
TDP1-206ENST00000553569 SPATA16Q9BXB7 569 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 ETNK1Q9HBU6 452 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 RAD18Q9NS91 495 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 PAK5Q9P286 719 aa22.7■■□□□ 1.22
TDP1-206ENST00000553569 TTC7AQ9ULT0 858 aaPredicted RBP22.7■■□□□ 1.22
TDP1-206ENST00000553569 DRG1Q9Y295 367 aaKnown RBP22.7■■□□□ 1.22
TDP1-206ENST00000553569 COL5A1P20908 1838 aaPredicted RBP22.69■■□□□ 1.22
TDP1-206ENST00000553569 FADS2P1A8MWK0 482 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 TRIM38O00635 465 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 AP2A1O95782 977 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 TNFP01375 233 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms