RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 PMPCAQ10713 525 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 LPAL2Q16609 132 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 FAM83BQ5T0W9 1011 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 CCDC117Q8IWD4 279 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-218ENST00000553309 ATG16L2Q8NAA4 619 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 DBF4BQ8NFT6 615 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 MORC4Q8TE76 937 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 RTP3Q9BQQ7 232 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 KATNAL1Q9BW62 490 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 TEX13BQ9BXU2 312 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 TASP1Q9H6P5 420 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 HMG20BQ9P0W2 317 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 DAPP1Q9UN19 280 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 DTX4Q9Y2E6 619 aa5.19□□□□□ -1.58
ATXN3-218ENST00000553309 HECTD1Q9ULT8 2610 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 MBD3L5A6NJ08 208 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 C5orf67F2Z3F1 127 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 WDR46O15213 610 aaKnown RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 NEURL1O76050 574 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 ACTL6BO94805 426 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 BAG3O95817 575 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 IFNA2P01563 188 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 LCKP06239 509 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 DCNP07585 359 aaKnown RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 PAX7P23759 505 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 PDIA3P30101 505 aaKnown RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 COPB2P35606 906 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 SERPINF1P36955 418 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 RFX5P48382 616 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 THBS3P49746 956 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 HTR6P50406 440 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 RCAN1P53805 252 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 TIMM10P62072 90 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 GALNT1Q10472 559 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 CCDC6Q16204 474 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 ODF3L2Q3SX64 289 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 TBRG1Q3YBR2 411 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 ARL13AQ5H913 290 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 WASHC2DQ5SRD0 308 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 ASPHD1Q5U4P2 390 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 NAA16Q6N069 864 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 NFRKBQ6P4R8 1299 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 C1orf228Q6PIY5 440 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 C19orf48Q6RUI8 117 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 TMEM200AQ86VY9 491 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 GPSM1Q86YR5 675 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 OR6J1Q8NGC5 347 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 SCAMP5Q8TAC9 235 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 INPP5DQ92835 1189 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 MARK4Q96L34 752 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 CRB3Q9BUF7 120 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 POMKQ9H5K3 350 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 TLE6Q9H808 572 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 VCPKMTQ9H867 229 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 RAVER2Q9HCJ3 691 aaKnown RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 SCN10AQ9Y5Y9 1956 aa5.18□□□□□ -1.58
ATXN3-218ENST00000553309 SMG1Q96Q15 3661 aaKnown RBP5.18□□□□□ -1.58
ATXN3-218ENST00000553309 DSPP15924 2871 aaKnown RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 FSD2A1L4K1 749 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 FAM90A8PA6NJQ4 464 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 RB1P06400 928 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 FAM90A13PP0C7W8 464 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 FAM90A24PP0C7X0 464 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 FAM200BP0CF97 657 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 HOXB2P14652 356 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ABCD1P33897 745 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 PCP4P48539 62 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 NANOS2P60321 138 aaKnown RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 AP2B1P63010 937 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ICA1Q05084 483 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 RPS6KA2Q15349 733 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ENTPD8Q5MY95 495 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 RUSC1-AS1Q66K80 236 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 KLHL17Q6TDP4 642 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 KIAA1324Q6UXG2 1013 aaKnown RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ZNF771Q7L3S4 317 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 RTL10Q7L3V2 364 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ANKS1BQ7Z6G8 1248 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 KLBQ86Z14 1044 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 SLC44A2Q8IWA5 706 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 MIGA1Q8NAN2 632 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 TDRD5Q8NAT2 981 aaKnown RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 SPATA5Q8NB90 893 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 FAM110DQ8TAY7 271 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 POF1BQ8WVV4 589 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 TOP1MTQ969P6 601 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ZNF419Q96HQ0 510 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 NEK1Q96PY6 1258 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 NPAS1Q99742 590 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ISCUQ9H1K1 167 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 S1PR5Q9H228 398 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 HIPK2Q9H2X6 1198 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ELAC1Q9H777 363 aaKnown RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 ZNF304Q9HCX3 659 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 SEPSECSQ9HD40 501 aaKnown RBP5.17□□□□□ -1.58
ATXN3-218ENST00000553309 LRFN1Q9P244 771 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 LZTS1Q9Y250 596 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 DAAM1Q9Y4D1 1078 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 FANCMQ8IYD8 2048 aa5.17□□□□□ -1.58
ATXN3-218ENST00000553309 PDS5AQ29RF7 1337 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms