RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ULK4Q96C45 1275 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 HIC2Q96JB3 615 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 BMFQ96LC9 184 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 TTC25Q96NG3 672 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 TEX101Q9BY14 249 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 EBF2Q9HAK2 575 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 RAB6BQ9NRW1 208 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 DNAJC28Q9NX36 388 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 DOLKQ9UPQ8 538 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 APOBEC2Q9Y235 224 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 ZNF711Q9Y462 761 aa10.24□□□□□ -0.77
TRAFD1-208ENST00000552890 TTC24A2A3L6 582 aaPredicted RBP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 HEATR9A2RTY3 570 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 POM121BA6NF01 834 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 CFAP99D6REC4 459 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 QSOX1O00391 747 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 SCAMP1O15126 338 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 PHF2O75151 1096 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 GJB3O75712 270 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 CLDN7O95471 211 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 PCCBP05166 539 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 APRTP07741 180 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 GSTM1P09488 218 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 JUNDP17535 347 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 EPHA8P29322 1005 aaPredicted RBP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 ADRA1AP35348 466 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 SPAM1P38567 509 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 ETV3P41162 512 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 NPY2RP49146 381 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 HK3P52790 923 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 GSTM4Q03013 218 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 ILF3Q12906 894 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 SNX1Q13596 522 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 GTF2H3Q13889 308 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 DHX34Q14147 1143 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 FGL2Q14314 439 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 GALNT3Q14435 633 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 PPP1R7Q15435 360 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 CCDC6Q16204 474 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 GPR33Q49SQ1 333 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 LRRC73Q5JTD7 316 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 LDLRAP1Q5SW96 308 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 LYPLAL1Q5VWZ2 237 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 TCEAL6Q6IPX3 200 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 BBOF1Q8ND07 529 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 MNS1Q8NEH6 495 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 WDR48Q8TAF3 677 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 BLOC1S5Q8TDH9 187 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 RHBDD1Q8TEB9 315 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 SETD7Q8WTS6 366 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 STYXQ8WUJ0 223 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 SLCO2A1Q92959 643 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 TCEAL3Q969E4 200 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 OXNAD1Q96HP4 312 aaPredicted RBP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 VPS35Q96QK1 796 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 HERPUD2Q9BSE4 406 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 FICDQ9BVA6 458 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 SPATA16Q9BXB7 569 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 IL22Q9GZX6 179 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 XAB2Q9HCS7 855 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 TRNAU1APQ9NX07 287 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 NLGN3Q9NZ94 848 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 UBP1Q9NZI7 540 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 PCYOX1Q9UHG3 505 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 GGT7Q9UJ14 662 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 PYCARDQ9ULZ3 195 aa10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 R3HDM2Q9Y2K5 976 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-208ENST00000552890 CNOT1A5YKK6 2376 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 DMDP11532 3685 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 TCRBV7S2A1N4TA0A589 114 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 A8MX80 341 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 LMO7DNF2Z398 122 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 H0Y8X5 98 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 TNFSF14O43557 240 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 PIAS2O75928 621 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 SLC25A14O95258 325 aaPredicted RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 WNT1P04628 370 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 IVLP07476 585 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 ANXA6P08133 673 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 ATXN1LP0C7T5 689 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 MLNP12872 115 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 PAMP19021 973 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 TPSB2P20231 275 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 LHCGRP22888 699 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 ADRA1DP25100 572 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 IGFALSP35858 605 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 COILP38432 576 aaPredicted RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 CLDN2P57739 230 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 SRP54P61011 504 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 BASP1P80723 227 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 CDK3Q00526 305 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 ILF2Q12905 390 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 FZD2Q14332 565 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 TPSAB1Q15661 275 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 AARS2Q5JTZ9 985 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 HENMT1Q5T8I9 393 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 KCTD11Q693B1 232 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 ZNF449Q6P9G9 518 aa10.22□□□□□ -0.77
TRAFD1-208ENST00000552890 ENPP7Q6UWV6 458 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms