RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 OPA1O60313 960 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 SOCS5O75159 536 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 USP12O75317 370 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 PMPCBO75439 489 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 GIMD1P0DJR0 217 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 DGKAP23743 735 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 GKP32189 559 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 RGRP47804 291 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 LSSP48449 732 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 NEK3P51956 506 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 GDF10P55107 478 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 POLR2LP62875 67 aaKnown RBP11.41□□□□□ -0.58
TMEM116-218ENST00000552839 KCNC4Q03721 635 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 VAC14Q08AM6 782 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 GPS1Q13098 491 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 MPP3Q13368 585 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 CYP1B1Q16678 543 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 FAXCQ5TGI0 409 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 PPP1R21Q6ZMI0 780 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 LSMEM2Q8N112 164 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 PGBD5Q8N414 524 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 SPATA4Q8NEY3 305 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 LPCAT1Q8NF37 534 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 IPMKQ8NFU5 416 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 OR4C6Q8NH72 309 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 ZNF641Q96N77 438 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-218ENST00000552839 DEPDC7Q96QD5 511 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 ADGRE3Q9BY15 652 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 POLR1BQ9H9Y6 1135 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 NOD2Q9HC29 1040 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 ASCL3Q9NQ33 180 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 RAB6BQ9NRW1 208 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 UCKL1Q9NWZ5 548 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 UBP1Q9NZI7 540 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 SARDHQ9UL12 918 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 DMTF1Q9Y222 760 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 ATP8A1Q9Y2Q0 1164 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 WASF2Q9Y6W5 498 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 PDE2AO00408 941 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-218ENST00000552839 NDC80O14777 642 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 MUSKO15146 869 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 FFAR2O15552 330 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 PLRG1O43660 514 aaKnown RBP11.4□□□□□ -0.58
TMEM116-218ENST00000552839 CSO75390 466 aaKnown RBP11.4□□□□□ -0.58
TMEM116-218ENST00000552839 GCATO75600 419 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 WISP1O95388 367 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 CKMT1AP12532 417 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 MYF5P13349 255 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 ITGB7P26010 798 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 NUDT1P36639 197 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 ADCY8P40145 1251 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 SARNPP82979 210 aaKnown RBP11.4□□□□□ -0.58
TMEM116-218ENST00000552839 PARP6Q2NL67 630 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 ZNF805Q5CZA5 627 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 BRAT1Q6PJG6 821 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 SYDE1Q6ZW31 735 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-218ENST00000552839 USP45Q70EL2 814 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 KDELC2Q7Z4H8 507 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 TRIM69Q86WT6 500 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 CAMK1DQ8IU85 385 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 IMP4Q96G21 291 aaKnown RBP11.4□□□□□ -0.58
TMEM116-218ENST00000552839 MED8Q96G25 268 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 KLHDC7BQ96G42 594 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 FCRL5Q96RD9 977 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 FICDQ9BVA6 458 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 CPEB1Q9BZB8 566 aaKnown RBP11.4□□□□□ -0.58
TMEM116-218ENST00000552839 DPH1Q9BZG8 443 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 SUV39H2Q9H5I1 410 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 LRRC40Q9H9A6 602 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 PCDHGC4Q9Y5F7 938 aa11.4□□□□□ -0.58
TMEM116-218ENST00000552839 CFAP46Q8IYW2 2715 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 LY6G6EA0A0G2JKS1 128 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 C16orf96A6NNT2 1141 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 PRAMEF26H0Y7S4 382 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 SLC7A4O43246 635 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 SLC28A2O43868 658 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 ZNF821O75541 412 aaPredicted RBP11.39□□□□□ -0.59
TMEM116-218ENST00000552839 PIAS2O75928 621 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 MT-CYBP00156 380 aaPredicted RBP11.39□□□□□ -0.59
TMEM116-218ENST00000552839 SLC4A1P02730 911 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 CTSLP07711 333 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 CYP2A6P11509 494 aaPredicted RBP11.39□□□□□ -0.59
TMEM116-218ENST00000552839 ETS1P14921 441 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 CDK18Q07002 472 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 NIPAL4Q0D2K0 466 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 ELP6Q0PNE2 266 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 CALCOCO2Q13137 446 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 SLC14A2Q15849 920 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 AGBL4Q5VU57 503 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 ALG1LQ6GMV1 187 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 ERN2Q76MJ5 926 aaKnown RBP11.39□□□□□ -0.59
TMEM116-218ENST00000552839 PARS2Q7L3T8 475 aaKnown RBP11.39□□□□□ -0.59
TMEM116-218ENST00000552839 JAMLQ86YT9 394 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 CNTD1Q8N815 330 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 DNAAF3Q8N9W5 541 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 SPATA22Q8NHS9 363 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 CXorf40AQ8TE69 158 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 RTP4Q96DX8 246 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms