RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 IPMKQ8NFU5 416 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 ATL2Q8NHH9 583 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 B4GALNT2Q8NHY0 566 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 SLC35B2Q8TB61 432 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 FAM81AQ8TBF8 368 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 HCAR2Q8TDS4 363 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 MAIP1Q8WWC4 291 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 FAM131CQ96AQ9 280 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 RMDN1Q96DB5 314 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 ECHDC3Q96DC8 303 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 IFT43Q96FT9 208 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 NAF1Q96HR8 494 aaKnown RBP9.97□□□□□ -0.81
LETMD1-234ENST00000552645 SLC6A18Q96N87 628 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 TRAPPC9Q96Q05 1148 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 SMIM14Q96QK8 99 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 GORASP1Q9BQQ3 440 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 TDRD1Q9BXT4 1180 aaKnown RBP9.97□□□□□ -0.81
LETMD1-234ENST00000552645 USP29Q9HBJ7 922 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 PCDH9Q9HC56 1237 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 ZFR2Q9UPR6 939 aaKnown RBP9.97□□□□□ -0.81
LETMD1-234ENST00000552645 CA5BQ9Y2D0 317 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 COQ6Q9Y2Z9 468 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 L3MBTL1Q9Y468 752 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 PCDHGA5Q9Y5G8 931 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 TMEM131Q92545 1883 aa9.97□□□□□ -0.81
LETMD1-234ENST00000552645 A0A0U1RQS6 177 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 A0A1W2PPC4 97 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 A0A1W2PQ67 120 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 PGRMC1O00264 195 aaKnown RBP9.96□□□□□ -0.81
LETMD1-234ENST00000552645 AREL1O15033 823 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 KHNYNO15037 678 aaKnown RBP9.96□□□□□ -0.81
LETMD1-234ENST00000552645 RAD51CO43502 376 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 LZTS3O60299 673 aaPredicted RBP9.96□□□□□ -0.81
LETMD1-234ENST00000552645 PAK4O96013 591 aaPredicted RBP9.96□□□□□ -0.81
LETMD1-234ENST00000552645 SLC4A1P02730 911 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 ELFN1P0C7U0 828 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 NFKBIAP25963 317 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 PSMB4P28070 264 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 MMP12P39900 470 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 CSNK1EP49674 416 aaKnown RBP9.96□□□□□ -0.81
LETMD1-234ENST00000552645 GDF10P55107 478 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 TAF11Q15544 211 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 KCTD19Q17RG1 926 aaPredicted RBP9.96□□□□□ -0.81
LETMD1-234ENST00000552645 NEK5Q6P3R8 708 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 USP45Q70EL2 814 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 GSTA5Q7RTV2 222 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 TBC1D1Q86TI0 1168 aaPredicted RBP9.96□□□□□ -0.81
LETMD1-234ENST00000552645 KIAA2013Q8IYS2 634 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 NDUFAF2Q8N183 169 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 DNASE2BQ8WZ79 361 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 SPATA13Q96N96 652 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 KRT12Q99456 494 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 FSD1LQ9BXM9 530 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 ADGRE3Q9BY15 652 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 SLC17A9Q9BYT1 436 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 RAB17Q9H0T7 212 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 GBA3Q9H227 469 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 VPS45Q9NRW7 570 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 SEMA4GQ9NTN9 838 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 B4GALT6Q9UBX8 382 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 SUSD2Q9UGT4 822 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 PHTF1Q9UMS5 762 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 LRRC42Q9Y546 428 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 ZNF292O60281 2723 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 CACNA1EQ15878 2313 aa9.96□□□□□ -0.81
LETMD1-234ENST00000552645 TDRD6O60522 2096 aaKnown RBP9.96□□□□□ -0.81
LETMD1-234ENST00000552645 A0A1B0GTW7 788 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 ESYT3A0FGR9 886 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 CFAP69A5D8W1 941 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 NPIPB15A6NHN6 443 aaPredicted RBP9.96□□□□□ -0.82
LETMD1-234ENST00000552645 WNT9AO14904 365 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 LATO43561 262 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 OPHN1O60890 802 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 SMIM24O75264 130 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 TM7SF2O76062 418 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 PIRTP0C851 137 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 C6P13671 934 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 DPP6P42658 865 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 KCNJ1P48048 391 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 SUOXP51687 545 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 AFF3P51826 1226 aaKnown RBP9.96□□□□□ -0.82
LETMD1-234ENST00000552645 WNT3AP56704 352 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 CLDN2P57739 230 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 MAGOHP61326 146 aaKnown RBP9.96□□□□□ -0.82
LETMD1-234ENST00000552645 IRX4P78413 519 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 ARHGEF7Q14155 803 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 PRPSAP1Q14558 356 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 STAT4Q14765 748 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 ACOX1Q15067 660 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 SIX1Q15475 284 aaPredicted RBP9.96□□□□□ -0.82
LETMD1-234ENST00000552645 CCNG2Q16589 344 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 DUOXA1Q1HG43 343 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 FAXCQ5TGI0 409 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 PRUNE1Q86TP1 453 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 TSPAN33Q86UF1 283 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 SLC25A41Q8N5S1 370 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 CCDC89Q8N998 374 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 PIH1D2Q8WWB5 315 aa9.96□□□□□ -0.82
LETMD1-234ENST00000552645 SEC14L1Q92503 715 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms