RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 CHFRQ96EP1 664 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 OLFM1Q99784 485 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 AARSD1Q9BTE6 412 aaKnown RBP12.66□□□□□ -0.38
CACNB3-223ENST00000552480 MTG2Q9H4K7 406 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 POPDC3Q9HBV1 291 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 TMEM216Q9P0N5 145 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 SIRPGQ9P1W8 387 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 B4GALT6Q9UBX8 382 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 MID2Q9UJV3 735 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 APPL1Q9UKG1 709 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 VWA7Q9Y334 891 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 NUMBLQ9Y6R0 609 aa12.66□□□□□ -0.38
CACNB3-223ENST00000552480 GAPDHSO14556 408 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 EDF1O60869 148 aaKnown RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 SRP72O76094 671 aaKnown RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 KLHL2O95198 593 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 WISP3O95389 354 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 PRNPP04156 253 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 APODP05090 189 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 C1SP09871 688 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 NEFHP12036 1026 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 BPIP17213 487 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 ITGALP20701 1170 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 BGNP21810 368 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 LHCGRP22888 699 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 VIPR1P32241 457 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 GMPRP36959 345 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 PPARGP37231 505 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 SLC26A3P40879 764 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 SUOXP51687 545 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 KPNA2P52292 529 aaKnown RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 CDKN2DP55273 166 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF460Q14592 562 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 ZSCAN26Q16670 478 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 C9orf64Q5T6V5 341 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 LYPLAL1Q5VWZ2 237 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 ZDHHC20Q5W0Z9 365 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 ATG16L1Q676U5 607 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 LRRC66Q68CR7 880 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 CERS6Q6ZMG9 384 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 SNX20Q7Z614 316 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 PIGWQ7Z7B1 504 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 TBC1D1Q86TI0 1168 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 NUDCD3Q8IVD9 361 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 SUGP1Q8IWZ8 645 aaKnown RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 PIANPQ8IYJ0 282 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 CENPLQ8N0S6 344 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 STK40Q8N2I9 435 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 MICALL1Q8N3F8 863 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF366Q8N895 744 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 PNPLA1Q8N8W4 532 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 TMIEQ8NEW7 156 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 RDH11Q8TC12 318 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 KCTD4Q8WVF5 259 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 OR8D1Q8WZ84 308 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 RPP25Q9BUL9 199 aaKnown RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 MECRQ9BV79 373 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 TMEM245Q9H330 911 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 NMRAL1Q9HBL8 299 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 ZNF358Q9NW07 568 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 THAP10Q9P2Z0 257 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-223ENST00000552480 CRYL1Q9Y2S2 319 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 COMMD10Q9Y6G5 202 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 TRANK1O15050 2925 aa12.65□□□□□ -0.38
CACNB3-223ENST00000552480 TRBV5-4A0A0C4DH59 114 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 GLYATL1P3A0A0U1RQE8 302 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 UBA6A0AVT1 1052 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-223ENST00000552480 C16orf96A6NNT2 1141 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 PRAMEF1O95521 474 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 IL1BP01584 269 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-223ENST00000552480 HLA-EP13747 358 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 TIMP2P16035 220 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 XPAP23025 273 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-223ENST00000552480 ALDH3A1P30838 453 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 PTGER3P43115 390 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 CDKN1CP49918 316 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-223ENST00000552480 ADARP55265 1226 aaKnown RBP12.64□□□□□ -0.39
CACNB3-223ENST00000552480 IRX4P78413 519 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 ARHGEF7Q14155 803 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 PCLAFQ15004 111 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 E2F5Q15329 346 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 LRRC8EQ6NSJ5 796 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 FAM151BQ6UXP7 276 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 SERPINA13PQ6UXR4 307 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 FAM47EQ6ZV65 393 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 DPPA4Q7L190 304 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 TAS2R42Q7RTR8 314 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 SFTPA1Q8IWL2 248 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 CSGALNACT1Q8TDX6 532 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 PBXIP1Q96AQ6 731 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 SEC16BQ96JE7 1060 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 PLEKHG4BQ96PX9 1271 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 GAS2L1Q99501 681 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-223ENST00000552480 TTC1Q99614 292 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 PITPNM3Q9BZ71 974 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 CCDC68Q9H2F9 335 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms