RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 USP28Q96RU2 1077 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 VRK1Q99986 396 aaPredicted RBP6.39□□□□□ -1.39
LETMD1-233ENST00000552433 ERP44Q9BS26 406 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 TEX12Q9BXU0 123 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 ITPAQ9BY32 194 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 NDST4Q9H3R1 872 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 RAD21L1Q9H4I0 556 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 SYNDIG1Q9H7V2 258 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 SPACA1Q9HBV2 294 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 SAYSD1Q9NPB0 183 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 PFDN4Q9NQP4 134 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 AGPAT5Q9NUQ2 364 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 TAB2Q9NYJ8 693 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 SELENONQ9NZV5 590 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 C5AR2Q9P296 337 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 ARPP21Q9UBL0 812 aaPredicted RBP6.39□□□□□ -1.39
LETMD1-233ENST00000552433 APPL1Q9UKG1 709 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 TBX20Q9UMR3 447 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 SLC8A2Q9UPR5 921 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 SYNMO15061 1565 aa6.39□□□□□ -1.39
LETMD1-233ENST00000552433 CCDC195A0A1B0GUA6 201 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 ADM5C9JUS6 153 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 F8W8V4 182 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 DTNBO60941 627 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 IDH1O75874 414 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 TMCC1O94876 653 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 ARP10275 920 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 GHRP10912 638 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 PRPS2P11908 318 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 KRT3P12035 628 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 PPP3CBP16298 524 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CASTP20810 708 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 U2AF2P26368 475 aaKnown RBP eCLIP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 GRIA3P42263 894 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CCR5P51681 352 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 POLR2GP62487 172 aaKnown RBP eCLIP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CYP4F2P78329 520 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 PRKCEQ02156 737 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 THOC5Q13769 683 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 DDX39BQ13838 428 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 KCNC3Q14003 757 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 KCTD21Q4G0X4 260 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 ZNF805Q5CZA5 627 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 BMP2KLQ5H9B9 411 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 FSCBQ5H9T9 825 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SPATA46Q5T0L3 261 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SLC9C2Q5TAH2 1124 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 DEPDC1Q5TB30 811 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 GRTP1Q5TC63 336 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 KLHDC7AQ5VTJ3 777 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 NCAPH2Q6IBW4 605 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 TRIM65Q6PJ69 517 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SLC36A4Q6YBV0 504 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 FAM83HQ6ZRV2 1179 aaPredicted RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 USP45Q70EL2 814 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 ZNF365Q70YC5 407 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 MARK2Q7KZI7 788 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 MAEAQ7L5Y9 396 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CHST3Q7LGC8 479 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 ADGRG6Q86SQ4 1221 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 ARMC8Q8IUR7 673 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 FAM217AQ8IXS0 508 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SYCE1Q8N0S2 351 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 PYROXD2Q8N2H3 581 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 TCAIMQ8N3R3 496 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 POMGNT2Q8NAT1 580 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 OR52M1Q8NGK5 317 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 FRAT1Q92837 279 aaPredicted RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SLC22A18Q96BI1 424 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 COA7Q96BR5 231 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 ALG14Q96F25 216 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SNX27Q96L92 541 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CEP19Q96LK0 163 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CAMK1GQ96NX5 476 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 KCNK16Q96T55 309 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 PUS3Q9BZE2 481 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 FAM129AQ9BZQ8 928 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 TRIM4Q9C037 500 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 RIBC2Q9H4K1 309 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 AGPAT3Q9NRZ7 376 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 FARSBQ9NSD9 589 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 DDX43Q9NXZ2 648 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 BAIAP2L1Q9UHR4 511 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SERPINB13Q9UIV8 391 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 FEM1BQ9UK73 627 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 AGAP1Q9UPQ3 857 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CHKBQ9Y259 395 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 NUDCQ9Y266 331 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 ZNF510Q9Y2H8 683 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 NPATQ14207 1427 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CNTLNQ9NXG0 1405 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 KDM5CP41229 1560 aa6.38□□□□□ -1.39
LETMD1-233ENST00000552433 CLTCQ00610 1675 aaKnown RBP6.38□□□□□ -1.39
LETMD1-233ENST00000552433 SHANK2Q9UPX8 1470 aa6.37□□□□□ -1.39
LETMD1-233ENST00000552433 SCAPERQ9BY12 1400 aa6.37□□□□□ -1.39
LETMD1-233ENST00000552433 LOC100506127A0A0U1RQW1 187 aa6.37□□□□□ -1.39
LETMD1-233ENST00000552433 C1orf232A0A0U1RR37 186 aa6.37□□□□□ -1.39
LETMD1-233ENST00000552433 A0A1W2PRV1 198 aa6.37□□□□□ -1.39
LETMD1-233ENST00000552433 A4D1N5 150 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms