RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ACOX1Q15067 660 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PSMD5Q16401 504 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 DPY19L1Q2PZI1 675 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SPATS1Q496A3 300 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 RBM48Q5RL73 367 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CATSPEREQ5SY80 951 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 LGSNQ5TDP6 509 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PXDC1Q5TGL8 231 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 STEAP4Q687X5 459 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 KDM4DQ6B0I6 523 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 LAIR2Q6ISS4 152 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF544Q6NX49 715 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CRTC3Q6UUV7 619 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 MFSD7Q6UXD7 560 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SPOCD1Q6ZMY3 1216 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF767PQ75MW2 155 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 MON1BQ7L1V2 547 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 HEATR3Q7Z4Q2 680 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 MCATQ8IVS2 390 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 AQP12AQ8IXF9 295 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 REXO1Q8N1G1 1221 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 TDRD5Q8NAT2 981 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 OR5H6Q8NGV6 325 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 OR2T3Q8NH03 318 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ZFAND1Q8TCF1 268 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 MAPK15Q8TD08 544 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 TAS1R2Q8TE23 839 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SLC22A17Q8WUG5 538 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 LPGAT1Q92604 370 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 HDAC2Q92769 488 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 KAT5Q92993 513 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 NKD1Q969G9 470 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 C1orf74Q96LT6 269 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 OPALINQ96PE5 141 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CPXM1Q96SM3 734 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 REEP2Q9BRK0 252 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 FUNDC2Q9BWH2 189 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 HEMGNQ9BXL5 484 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 C2orf40Q9H1Z8 148 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SERHL2Q9H4I8 314 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CCSER2Q9H7U1 834 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 IFT22Q9H7X7 185 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 WDR41Q9HAD4 459 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 EFCAB1Q9HAE3 211 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 WDR6Q9NNW5 1121 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 UBE2TQ9NPD8 197 aaPredicted RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 DCP1AQ9NPI6 582 aaPredicted RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ANLNQ9NQW6 1124 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CHST12Q9NRB3 414 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 AGPAT3Q9NRZ7 376 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 C20orf96Q9NUD7 363 aaPredicted RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM260Q9NX78 707 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 MTMR10Q9NXD2 777 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM181Q9P2C4 612 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 TXNDC16Q9P2K2 825 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SLCO3A1Q9UIG8 710 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 OSGIN1Q9UJX0 560 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF221Q9UK13 617 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 DIMT1Q9UNQ2 313 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CDY2AQ9Y6F7 541 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CDY1Q9Y6F8 540 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 TNRC6CQ9HCJ0 1690 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PAPPAQ13219 1627 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 FRMPD2Q68DX3 1309 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 METTL15A6NJ78 407 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PRR19A6NJB7 356 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 FAM170BA6NMN3 283 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CENPXA8MT69 81 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 C12orf71A8MTZ7 269 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 KBTBD13C9JR72 458 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 H3BMM5 538 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NOP56O00567 594 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TOR1AO14656 332 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TBX3O15119 743 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 GRID2O43424 1007 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DCXO43602 365 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 EXTL3O43909 919 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF780AO75290 641 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 LEFTY1O75610 366 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CCNKO75909 580 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DDHD2O94830 711 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SEC24DO94855 1032 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 LRIG2O94898 1065 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PRSS23O95084 383 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CST3P01034 146 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ITGB3P05106 788 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 KRT8P05787 483 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TRIM49P0CI25 452 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TRIM49CP0CI26 452 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CYP2D6P10635 497 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 IL1R1P14778 569 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DNAJB1P25685 340 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 LTKP29376 864 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 EEF1DP29692 281 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 HSPA1LP34931 641 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 RPS5P46782 204 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SOX9P48436 509 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SLC9A3P48764 834 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CSRP3P50461 194 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NUDT2P50583 147 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms