RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CEP44Q9C0F1 390 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 KDM4CQ9H3R0 1056 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 OXSMQ9NWU1 459 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 CAPN8A6NHC0 703 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 DLX3O60479 287 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 TGDSO95455 350 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 KCNC1P48547 511 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 RPL26P61254 145 aaKnown RBP19.64■□□□□ 0.73
SSH1-209ENST00000551165 SULT2A1Q06520 285 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 DMC1Q14565 340 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 FAM45BPQ6NSW5 357 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 CRTC1Q6UUV9 634 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 FAM45AQ8TCE6 357 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 GATA5Q9BWX5 397 aaPredicted RBP19.64■□□□□ 0.73
SSH1-209ENST00000551165 SLC2A11Q9BYW1 496 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 RPL26L1Q9UNX3 145 aaKnown RBP19.64■□□□□ 0.73
SSH1-209ENST00000551165 FAM50BQ9Y247 325 aa19.64■□□□□ 0.73
SSH1-209ENST00000551165 PRRT4C9JH25 899 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 H7C0S8 307 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 TNRC18O15417 2968 aaPredicted RBP19.63■□□□□ 0.73
SSH1-209ENST00000551165 HOXC11O43248 304 aaPredicted RBP19.63■□□□□ 0.73
SSH1-209ENST00000551165 NDUFS3O75489 264 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 POP4O95707 220 aaKnown RBP19.63■□□□□ 0.73
SSH1-209ENST00000551165 CORO7P57737 925 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 DBN1Q16643 649 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 TAS2R42Q7RTR8 314 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 ETFBKMTQ8IXQ9 262 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 MYLK2Q9H1R3 596 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 INTS10Q9NVR2 710 aaKnown RBP19.63■□□□□ 0.73
SSH1-209ENST00000551165 PNPOQ9NVS9 261 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 DNAJC16Q9Y2G8 782 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 CXorf51AA0A1B0GTR3 108 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 KCNA5P22460 613 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 LHCGRP22888 699 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 TSPAN17Q96FV3 270 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 PRR11Q96HE9 360 aaPredicted RBP19.63■□□□□ 0.73
SSH1-209ENST00000551165 KLHL32Q96NJ5 620 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 SLC30A3Q99726 388 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 FAM83CQ9BQN1 747 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 CPEB1Q9BZB8 566 aaKnown RBP19.63■□□□□ 0.73
SSH1-209ENST00000551165 PLA2G2FQ9BZM2 168 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 IL26Q9NPH9 171 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 HPS4Q9NQG7 708 aa19.63■□□□□ 0.73
SSH1-209ENST00000551165 SCN8AQ9UQD0 1980 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 TRIM13O60858 407 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 ADH1CP00326 375 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 CTSLP07711 333 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 BPIP17213 487 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 ARFIP2P53365 341 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 ABCE1P61221 599 aaKnown RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 DLX2Q07687 328 aaPredicted RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 POM121L1PQ3SYA9 428 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 GALNTL6Q49A17 601 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 TECRLQ5HYJ1 363 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 VITQ6UXI7 678 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 CRLF3Q8IUI8 442 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 CDCA3Q99618 268 aaPredicted RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 DZANK1Q9NVP4 752 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 DOCK8Q8NF50 2099 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 SRP72O76094 671 aaKnown RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 LTA4HP09960 611 aaKnown RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 UGT1A6P19224 532 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 UGT1A1P22309 533 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 UGT1A4P22310 534 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 UGT1A3P35503 534 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 UGT1A5P35504 534 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 LACTB2Q53H82 288 aaPredicted RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 CTSL3PQ5NE16 218 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 ANKRD54Q6NXT1 300 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 MTDHQ86UE4 582 aaKnown RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 TXNDC5Q8NBS9 432 aaKnown RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 SCRN2Q96FV2 425 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 TUBGCP5Q96RT8 1024 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 MRPL46Q9H2W6 279 aaKnown RBP19.62■□□□□ 0.73
SSH1-209ENST00000551165 WASF2Q9Y6W5 498 aa19.62■□□□□ 0.73
SSH1-209ENST00000551165 IQCF5A8MTL0 148 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 NIPSNAP2O75323 286 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 CHRNGP07510 517 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 LIG3P49916 1009 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 NAGLUP54802 743 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 GRM2Q14416 872 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 FAM83EQ2M2I3 478 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 ARSIQ5FYB1 569 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 LRRC66Q68CR7 880 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 LCA5Q86VQ0 697 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 ZNF557Q8N988 423 aaPredicted RBP19.61■□□□□ 0.73
SSH1-209ENST00000551165 PTERQ96BW5 349 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 TIFAQ96CG3 184 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 ERP27Q96DN0 273 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 H3BMM5 538 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 ZBTB14O43829 449 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 LEFTY1O75610 366 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 PRAMEF1O95521 474 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 APOA4P06727 396 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 CHRM1P11229 460 aaPredicted RBP19.61■□□□□ 0.73
SSH1-209ENST00000551165 GRK2P25098 689 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 SUOXP51687 545 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 AQP5P55064 265 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 PTSQ03393 145 aa19.61■□□□□ 0.73
SSH1-209ENST00000551165 KDSRQ06136 332 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms