RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 RBM41Q96IZ5 413 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 RPGRIP1Q96KN7 1286 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 LRRC3BQ96PB8 259 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PEBP4Q96S96 227 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF670Q9BS34 389 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 SNRNP25Q9BV90 132 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 SLC2A11Q9BYW1 496 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 NELFAQ9H3P2 528 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 POFUT1Q9H488 388 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 ZWILCHQ9H900 591 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 ANLNQ9NQW6 1124 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 DUS2Q9NX74 493 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 TRMT1Q9NXH9 659 aaKnown RBP5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PLA2G3Q9NZ20 509 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 COX16Q9P0S2 106 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 OR12D3Q9UGF7 316 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PCSK1NQ9UHG2 260 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PLAAQ9Y263 795 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 HS3ST4Q9Y661 456 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 NUMBLQ9Y6R0 609 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 PRUNE2Q8WUY3 3088 aa5.88□□□□□ -1.47
SCAF11-213ENST00000550629 DENND4CQ5VZ89 1909 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 BRWD1Q9NSI6 2320 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 CXorf51AA0A1B0GTR3 108 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 A0A1B0GVM2 712 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 PMS2P1A4D2B8 440 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 E9PAM4 449 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 CES2O00748 559 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 CLDN11O75508 207 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 APOL3O95236 402 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 FTCDO95954 541 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 MOCS2O96007 188 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 IL9P15248 144 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 TCF4P15884 667 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 PRLRP16471 622 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 MSX2P35548 267 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 DEKP35659 375 aaKnown RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 EIF2DP41214 584 aaKnown RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ARSEP51690 589 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ATXN1P54253 815 aaKnown RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 SESN2P58004 480 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 GNG11P61952 73 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ADCY2Q08462 1091 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 KRT81Q14533 505 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 GRM7Q14831 915 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 RPS6KA1Q15418 735 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ITPRIPL2Q3MIP1 535 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 PREPLQ4J6C6 727 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 RAB6CQ53S08 254 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ODF2Q5BJF6 829 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 TFDP3Q5H9I0 405 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 CRB2Q5IJ48 1285 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 KCNT1Q5JUK3 1230 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF569Q5MCW4 686 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 FBXL22Q6P050 247 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 UNQ6494/PRO21346Q6UXR6 183 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF783Q6ZMS7 281 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 RFX8Q6ZV50 586 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 CHST9Q7L1S5 443 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 BMP8AQ7Z5Y6 402 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 CHSY1Q86X52 802 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 SUGP1Q8IWZ8 645 aaKnown RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ZZZ3Q8IYH5 903 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 UBALD2Q8IYN6 164 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 AHI1Q8N157 1196 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 EXOC4Q96A65 974 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 FAF2Q96CS3 445 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 SLC7A6OSQ96CW6 309 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 TBC1D31Q96DN5 1066 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 MFSD3Q96ES6 412 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 TMA16Q96EY4 203 aaKnown RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 KXD1Q9BQD3 176 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 TLR10Q9BXR5 811 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ZYG11BQ9C0D3 744 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 SIK2Q9H0K1 926 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 RAB6CQ9H0N0 254 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 CARD9Q9H257 536 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 DHX35Q9H5Z1 703 aaKnown RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 CATSPERBQ9H7T0 1116 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 SLC2A4RGQ9NR83 387 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 SPHK2Q9NRA0 654 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 POLR3BQ9NW08 1133 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 DNAI1Q9UI46 699 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 TBC1D30Q9Y2I9 924 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 RAD54BQ9Y620 910 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 WNT6Q9Y6F9 365 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 HELZP42694 1942 aaKnown RBP5.87□□□□□ -1.47
SCAF11-213ENST00000550629 ANAPC1Q9H1A4 1944 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 MYO9BQ13459 2157 aa5.87□□□□□ -1.47
SCAF11-213ENST00000550629 KIF26AQ9ULI4 1882 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 LRRD1A4D1F6 860 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CTAGE9A4FU28 777 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 C3orf70A6NLC5 250 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 FAM72CH0Y354 149 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 EEF2KO00418 725 aaKnown RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CACNG3O60359 315 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms