RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ATPAF2Q8N5M1 289 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 PATE1Q8WXA2 126 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 JPH3Q8WXH2 748 aaPredicted RBP13.53□□□□□ -0.24
TROAP-211ENST00000549891 ART4Q93070 314 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 TRIM11Q96F44 468 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
TROAP-211ENST00000549891 NSMCE3Q96MG7 304 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 CATSPER2Q96P56 530 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 TEFMQ96QE5 360 aaKnown RBP13.53□□□□□ -0.24
TROAP-211ENST00000549891 OR2M4Q96R27 311 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 MCCC1Q96RQ3 725 aaPredicted RBP13.53□□□□□ -0.24
TROAP-211ENST00000549891 SYT11Q9BT88 431 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 SLC12A9Q9BXP2 914 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 NOD2Q9HC29 1040 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 MRPL47Q9HD33 250 aaKnown RBP13.53□□□□□ -0.24
TROAP-211ENST00000549891 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 CNOT8Q9UFF9 292 aaKnown RBP13.53□□□□□ -0.24
TROAP-211ENST00000549891 TUBD1Q9UJT1 453 aa13.53□□□□□ -0.24
TROAP-211ENST00000549891 NPIPB15A6NHN6 443 aaPredicted RBP13.52□□□□□ -0.25
TROAP-211ENST00000549891 B4E171 279 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 MAFKO60675 156 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 PGLSO95336 258 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 FTLP02792 175 aaPredicted RBP13.52□□□□□ -0.25
TROAP-211ENST00000549891 MYBL1P10243 752 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 THRAP10827 490 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 ZNF30P17039 623 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 UGT1A3P35503 534 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 TSPAN7P41732 249 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 MMP13P45452 471 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 FASLGP48023 281 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 POLD2P49005 469 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 PPM1FP49593 454 aaPredicted RBP13.52□□□□□ -0.25
TROAP-211ENST00000549891 TRAF2Q12933 501 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 LRP8Q14114 963 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 CLCA4Q14CN2 919 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 BOLA3Q53S33 107 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 TMEM71Q6P5X7 295 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 DOK6Q6PKX4 331 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 ADAMTSL4Q6UY14 1074 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 FAM129CQ86XR2 697 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 CACNA2D3Q8IZS8 1091 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 OR10G6Q8NH81 332 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 AP2M1Q96CW1 435 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 SCARF2Q96GP6 870 aaPredicted RBP13.52□□□□□ -0.25
TROAP-211ENST00000549891 SLC38A3Q99624 504 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 STN1Q9H668 368 aaKnown RBP13.52□□□□□ -0.25
TROAP-211ENST00000549891 LMBRD1Q9NUN5 540 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 HAUS2Q9NVX0 235 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 DNPEPQ9ULA0 475 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 PPIL1Q9Y3C6 166 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 B3GALT1Q9Y5Z6 326 aa13.52□□□□□ -0.25
TROAP-211ENST00000549891 ZNF891A8MT65 544 aaPredicted RBP13.51□□□□□ -0.25
TROAP-211ENST00000549891 DUX1O43812 170 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 PEX11BO96011 259 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 LIFP15018 202 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 CCR10P46092 362 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 MAXP61244 160 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 ASIC2Q16515 512 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 NKAIN2Q5VXU1 208 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 ZNF765Q7L2R6 523 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 POLNQ7Z5Q5 900 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 TECPR1Q7Z6L1 1165 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 NLRP8Q86W28 1048 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 GALNT13Q8IUC8 556 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 LRRC49Q8IUZ0 686 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 TP53INP2Q8IXH6 220 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 NRSN1Q8IZ57 195 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 PGBD5Q8N414 524 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 KIAA1143Q96AT1 154 aaPredicted RBP13.51□□□□□ -0.25
TROAP-211ENST00000549891 ZNF653Q96CK0 615 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 ZPBPQ9BS86 351 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 EFHD1Q9BUP0 239 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 TRIM7Q9C029 511 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 HAUS4Q9H6D7 363 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 ST14Q9Y5Y6 855 aa13.51□□□□□ -0.25
TROAP-211ENST00000549891 PTPN13Q12923 2485 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 LRRC53A6NM62 1247 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 EFCAB7A8K855 629 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 RAD1O60671 282 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 AMPD1P23109 780 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 MPSTP25325 297 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 CSF2RBP32927 897 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 NOP2P46087 812 aaKnown RBP13.5□□□□□ -0.25
TROAP-211ENST00000549891 ARSDP51689 593 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 EPHB1P54762 984 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 POLE2P56282 527 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 TLE1Q04724 770 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 KCNAB2Q13303 367 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 SMTNL2Q2TAL5 461 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 PYCR3Q53H96 274 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 LRRC66Q68CR7 880 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 WDR74Q6RFH5 385 aaPredicted RBP13.5□□□□□ -0.25
TROAP-211ENST00000549891 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 APTXQ7Z2E3 356 aaKnown RBP13.5□□□□□ -0.25
TROAP-211ENST00000549891 TSPAN33Q86UF1 283 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 RAVER1Q8IY67 606 aaKnown RBP13.5□□□□□ -0.25
TROAP-211ENST00000549891 SFRP1Q8N474 314 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 EXD1Q8NHP7 514 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 ZNF564Q8TBZ8 553 aaPredicted RBP13.5□□□□□ -0.25
TROAP-211ENST00000549891 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms