RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 ZNF765Q7L2R6 523 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 RAB11FIP2Q7L804 512 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 ZNF438Q7Z4V0 828 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 SLITRK4Q8IW52 837 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 MAP7D3Q8IWC1 876 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 FBXO39Q8N4B4 442 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 ARL14Q8N4G2 192 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 Q8N9G6 341 aaPredicted RBP13.39□□□□□ -0.27
GCN1-206ENST00000549815 OR8K1Q8NGG5 319 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 SCAMP4Q969E2 229 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 RNF157Q96PX1 679 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 LYSMD1Q96S90 227 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 AGAP2Q99490 1192 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 CHP1Q99653 195 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 GSDMCQ9BYG8 508 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 CPNE5Q9HCH3 593 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 DTLQ9NZJ0 730 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 TAAR2Q9P1P5 351 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 CHKBQ9Y259 395 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 PCDHGA7Q9Y5G6 932 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 CFAP46Q8IYW2 2715 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 BSNQ9UPA5 3926 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 C3orf70A6NLC5 250 aaPredicted RBP13.38□□□□□ -0.27
GCN1-206ENST00000549815 ZNF487B1APH4 448 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 B4GAT1O43505 415 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 PRB1P04280 392 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 TPM3P06753 285 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 HGFP14210 728 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 PTMSP20962 102 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 ADCY8P40145 1251 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 GPR1P46091 355 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 GNPDA1P46926 289 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 CTBSQ01459 385 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 ILF3Q12906 894 aaKnown RBP eCLIP13.38□□□□□ -0.27
GCN1-206ENST00000549815 CLN3Q13286 438 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 TRIM14Q14142 442 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 BROXQ5VW32 411 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 FOXR1Q6PIV2 292 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 VSTM4Q8IW00 320 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 RAVER1Q8IY67 606 aaKnown RBP13.38□□□□□ -0.27
GCN1-206ENST00000549815 CCDC13Q8IYE1 715 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 NAGSQ8N159 534 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 NDUFAF2Q8N183 169 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 PLD5Q8N7P1 536 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 CNTD1Q8N815 330 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 KIAA1524Q8TCG1 905 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 ZDHHC1Q8WTX9 485 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 AP2M1Q96CW1 435 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 COX14Q96I36 57 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 TMEM74Q96NL1 305 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 WDR24Q96S15 920 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 SUDS3Q9H7L9 328 aaPredicted RBP13.38□□□□□ -0.27
GCN1-206ENST00000549815 ABHD10Q9NUJ1 306 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 ACSL6Q9UKU0 697 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 PLEKHM1Q9Y4G2 1056 aa13.38□□□□□ -0.27
GCN1-206ENST00000549815 ZFC3H1O60293 1989 aaKnown RBP13.38□□□□□ -0.27
GCN1-206ENST00000549815 GOLGA6CA6NDK9 693 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 GOLGA6BA6NDN3 693 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 CBFA2T2O43439 604 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 MTA2O94776 668 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 CLDN7O95471 211 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 ECEL1O95672 775 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 GOLGA6DP0CG33 693 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 KRT10P13645 584 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 MX2P20592 715 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 RPL26P61254 145 aaKnown RBP13.37□□□□□ -0.27
GCN1-206ENST00000549815 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
GCN1-206ENST00000549815 ZBTB17Q13105 803 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 MESDQ14696 234 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 SLC9A4Q6AI14 798 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 VSIG1Q86XK7 387 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.37□□□□□ -0.27
GCN1-206ENST00000549815 SLC35G2Q8TBE7 412 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 PATE1Q8WXA2 126 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 CCDC97Q96F63 343 aaPredicted RBP13.37□□□□□ -0.27
GCN1-206ENST00000549815 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 PCDH9Q9HC56 1237 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 GOLGA6AQ9NYA3 693 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 DNPEPQ9ULA0 475 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 CNOT6Q9ULM6 557 aaKnown RBP13.37□□□□□ -0.27
GCN1-206ENST00000549815 RPL26L1Q9UNX3 145 aaKnown RBP13.37□□□□□ -0.27
GCN1-206ENST00000549815 TMEM98Q9Y2Y6 226 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 LOXL2Q9Y4K0 774 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 PCYT1BQ9Y5K3 369 aaPredicted RBP13.37□□□□□ -0.27
GCN1-206ENST00000549815 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
GCN1-206ENST00000549815 AHCTF1Q8WYP5 2266 aa13.37□□□□□ -0.27
GCN1-206ENST00000549815 EIF4E1BA6NMX2 242 aaKnown RBP13.36□□□□□ -0.27
GCN1-206ENST00000549815 K7ENP7 123 aa13.36□□□□□ -0.27
GCN1-206ENST00000549815 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
GCN1-206ENST00000549815 KCNK1O00180 336 aa13.36□□□□□ -0.27
GCN1-206ENST00000549815 PYGLP06737 847 aa13.36□□□□□ -0.27
GCN1-206ENST00000549815 SLC5A2P31639 672 aa13.36□□□□□ -0.27
GCN1-206ENST00000549815 EPHB1P54762 984 aa13.36□□□□□ -0.27
GCN1-206ENST00000549815 OR1D5P58170 312 aa13.36□□□□□ -0.27
GCN1-206ENST00000549815 IFI35P80217 286 aaPredicted RBP13.36□□□□□ -0.27
GCN1-206ENST00000549815 VAC14Q08AM6 782 aa13.36□□□□□ -0.27
GCN1-206ENST00000549815 QPCTQ16769 361 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms