RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 TTC24A2A3L6 582 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 NPIPB15A6NHN6 443 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 SUV39H1O43463 412 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 PYGLP06737 847 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 FAM87AP0C7U9 286 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 FGF3P11487 239 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 CCL4P13236 92 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 AK4P27144 223 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 IL1R2P27930 398 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 MMP13P45452 471 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 FASLGP48023 281 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 LRP8Q14114 963 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ASIC2Q16515 512 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ARMC12Q5T9G4 340 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 MARC1Q5VT66 337 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ZNF765Q7L2R6 523 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ZNF571Q7Z3V5 609 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 RAVER1Q8IY67 606 aaKnown RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 NDUFAF2Q8N183 169 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ATPAF2Q8N5M1 289 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 AGBL5Q8NDL9 886 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 RCBTB1Q8NDN9 531 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 TEKT4Q8WW24 435 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 NKD1Q969G9 470 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ZNF653Q96CK0 615 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 CCDC74BQ96LY2 380 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 CSPG4P5Q96PW8 444 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 OR2M4Q96R27 311 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 FUCA2Q9BTY2 467 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ASPSCR1Q9BZE9 553 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ADNPQ9H2P0 1102 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ETNK2Q9NVF9 386 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 GEMIN8Q9NWZ8 242 aaKnown RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 PDP2Q9P2J9 529 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 ST14Q9Y5Y6 855 aa12.81□□□□□ -0.36
PTCH1-218ENST00000548945 RP1L1Q8IWN7 2480 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-218ENST00000548945 GOLGA6CA6NDK9 693 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 GOLGA6BA6NDN3 693 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 B4E171 279 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 DDX3XO00571 662 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCH1-218ENST00000548945 PPM1DO15297 605 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 ARHGAP6O43182 974 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 PPFIA2O75334 1257 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 SOD1P00441 154 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 GOLGA6DP0CG33 693 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 THRAP10827 490 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 ZNF30P17039 623 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 WT1P19544 449 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-218ENST00000548945 AMPD1P23109 780 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 CES1P23141 567 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 CSTF2P33240 577 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCH1-218ENST00000548945 TSPAN7P41732 249 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 ACTR1BP42025 376 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 GPR1P46091 355 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 RAB15P59190 212 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 ACTR1AP61163 376 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 PIGHQ14442 188 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-218ENST00000548945 DENND2CQ68D51 928 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 TEX26Q8N6G2 289 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 PIH1D2Q8WWB5 315 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 PATE1Q8WXA2 126 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 HTR3CQ8WXA8 447 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 SLC12A9Q9BXP2 914 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 NAT10Q9H0A0 1025 aaKnown RBP12.8□□□□□ -0.36
PTCH1-218ENST00000548945 ISCUQ9H1K1 167 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 SLC25A18Q9H1K4 315 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 SUDS3Q9H7L9 328 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-218ENST00000548945 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCH1-218ENST00000548945 GOLGA6AQ9NYA3 693 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 KCNK4Q9NYG8 393 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 RCOR3Q9P2K3 495 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-218ENST00000548945 DNPEPQ9ULA0 475 aa12.8□□□□□ -0.36
PTCH1-218ENST00000548945 PRRC2CQ9Y520 2896 aaKnown RBP12.79□□□□□ -0.36
PTCH1-218ENST00000548945 PYCARD-AS1I3L0S3 204 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 AGRPO00253 132 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 CAPN5O15484 640 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-218ENST00000548945 FZD6O60353 706 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 POLD2P49005 469 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 ARSDP51689 593 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 KLHL30Q0D2K2 578 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 SMTNL2Q2TAL5 461 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 PYCR3Q53H96 274 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 ALG1LQ6GMV1 187 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 TMEM71Q6P5X7 295 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 TSPAN33Q86UF1 283 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 NRSN1Q8IZ57 195 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 NIPA2Q8N8Q9 360 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 PTCD2Q8WV60 388 aaKnown RBP12.79□□□□□ -0.36
PTCH1-218ENST00000548945 AP2M1Q96CW1 435 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 TEFMQ96QE5 360 aaKnown RBP12.79□□□□□ -0.36
PTCH1-218ENST00000548945 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 ABCG8Q9H221 673 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 PCDH18Q9HCL0 1135 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 AMACRQ9UHK6 382 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 TUBD1Q9UJT1 453 aa12.79□□□□□ -0.36
PTCH1-218ENST00000548945 USP9YO00507 2555 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-218ENST00000548945 A0A0J9YYE9 177 aa12.78□□□□□ -0.36
PTCH1-218ENST00000548945 TRBC1P01850 177 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms