RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 SEL1L3Q68CR1 1132 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 VOPP1Q96AW1 172 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 RPL10LQ96L21 214 aaKnown RBP20.87■□□□□ 0.93
RITA1-201ENST00000548278 GPR63Q9BZJ6 419 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 SHCBP1LQ9BZQ2 653 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 VPS9D1Q9Y2B5 631 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 SOBPA7XYQ1 873 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 SOCS5O75159 536 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 SRP72O76094 671 aaKnown RBP20.87■□□□□ 0.93
RITA1-201ENST00000548278 RHOBTB1O94844 696 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 SNUPNO95149 360 aaKnown RBP20.87■□□□□ 0.93
RITA1-201ENST00000548278 IGSF6O95976 241 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 SRCP12931 536 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 TTPAP49638 278 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 PDAP1Q13442 181 aaKnown RBP20.87■□□□□ 0.93
RITA1-201ENST00000548278 FUT11Q495W5 492 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 ZRANB3Q5FWF4 1079 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 ASTLQ6HA08 431 aaPredicted RBP20.87■□□□□ 0.93
RITA1-201ENST00000548278 BAIAP2L1Q9UHR4 511 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 PKP3Q9Y446 797 aa20.87■□□□□ 0.93
RITA1-201ENST00000548278 GYG2O15488 501 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 GSC2O15499 205 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 HNRNPA1P09651 372 aaKnown RBP eCLIP20.86■□□□□ 0.93
RITA1-201ENST00000548278 MYOGP15173 224 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 CPA2P48052 419 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 STK19P49842 368 aaPredicted RBP20.86■□□□□ 0.93
RITA1-201ENST00000548278 NTHL1P78549 312 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 PRSS36Q5K4E3 855 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 SLC22A9Q8IVM8 553 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 TEX9Q8N6V9 391 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 KDM1BQ8NB78 822 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 LEMD2Q8NC56 503 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 FAM13CQ8NE31 585 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 OR2AP1Q8NGE2 309 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 FAM136AQ96C01 138 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 OR52B2Q96RD2 323 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 CCDC68Q9H2F9 335 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 TAS2R13Q9NYV9 303 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 VTI1BQ9UEU0 232 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 HS3ST2Q9Y278 367 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 CHD7Q9P2D1 2997 aa20.86■□□□□ 0.93
RITA1-201ENST00000548278 A0A0J9YYE9 177 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 SLCO1B7G3V0H7 640 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 H3BMM5 538 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 TRBC1P01850 177 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 PTPRNQ16849 979 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 STON2Q8WXE9 905 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 ATP13A3Q9H7F0 1226 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 FAM50BQ9Y247 325 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 FNDC3AQ9Y2H6 1198 aaKnown RBP20.85■□□□□ 0.93
RITA1-201ENST00000548278 B2RBV5 119 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 F8W8V4 182 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 OR1I1O60431 355 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 XYLBO75191 536 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 SP100P23497 879 aaPredicted RBP20.85■□□□□ 0.93
RITA1-201ENST00000548278 C1QTNF8P60827 252 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 NFKB2Q00653 900 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 KDSRQ06136 332 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 ZNF77Q15935 545 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 CDKN3Q16667 212 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 METTL21CQ5VZV1 264 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 PAQR3Q6TCH7 311 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 IRF7Q92985 503 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 ISG20Q96AZ6 181 aaKnown RBP20.85■□□□□ 0.93
RITA1-201ENST00000548278 PHF21BQ96EK2 531 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 LINC00597Q9H2U6 94 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 SYTL2Q9HCH5 934 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 TCF7L2Q9NQB0 619 aa20.85■□□□□ 0.93
RITA1-201ENST00000548278 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.85■□□□□ 0.93
RITA1-201ENST00000548278 OAS3Q9Y6K5 1087 aaKnown RBP20.85■□□□□ 0.93
RITA1-201ENST00000548278 NEDD8-MDP1E9PL57 170 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 PFDN6O15212 129 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 PKMP14618 531 aaKnown RBP20.84■□□□□ 0.93
RITA1-201ENST00000548278 HNRNPLP14866 589 aaKnown RBP eCLIP20.84■□□□□ 0.93
RITA1-201ENST00000548278 AARS2Q5JTZ9 985 aaKnown RBP20.84■□□□□ 0.93
RITA1-201ENST00000548278 CTSL3PQ5NE16 218 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 FBXO27Q8NI29 283 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 RHEBL1Q8TAI7 183 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 ZSWIM3Q96MP5 696 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 BBS2Q9BXC9 721 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 TFB2MQ9H5Q4 396 aaKnown RBP20.84■□□□□ 0.93
RITA1-201ENST00000548278 WDR55Q9H6Y2 383 aaPredicted RBP20.84■□□□□ 0.93
RITA1-201ENST00000548278 SPECC1L-ADORA2AF8WAN1 911 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 RB1P06400 928 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 NCF2P19878 526 aaPredicted RBP20.84■□□□□ 0.93
RITA1-201ENST00000548278 IMPDH1P20839 514 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 CD9P21926 228 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 HNF1BP35680 557 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 SNRPD1P62314 119 aaKnown RBP20.84■□□□□ 0.93
RITA1-201ENST00000548278 CACNG1Q06432 222 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 OR4D1Q15615 310 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 ZSWIM9Q86XI8 627 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 RYBPQ8N488 228 aaPredicted RBP20.84■□□□□ 0.93
RITA1-201ENST00000548278 L3HYPDHQ96EM0 354 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 GPR21Q99679 349 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 C19orf43Q9BQ61 176 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 NUF2Q9BZD4 464 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 DERL2Q9GZP9 239 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 ZFYVE1Q9HBF4 777 aa20.84■□□□□ 0.93
RITA1-201ENST00000548278 GALPQ9UBC7 116 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms