RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 NRG2O14511 850 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 OGTO15294 1046 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 LRCH4O75427 683 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CHRNGP07510 517 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 GJB1P08034 283 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ZNF865P0CJ78 1059 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ALOX15P16050 662 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 JAK1P23458 1154 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 SUMO1P63165 101 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 HPCAP84074 193 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CYP1B1Q16678 543 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 UGP2Q16851 508 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 GJC2Q5T442 439 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 KCNMB4Q86W47 210 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 SPPL2CQ8IUH8 684 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CROCCP3Q8IVE0 287 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 IGDCC3Q8IVU1 814 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 EFHBQ8N7U6 833 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 FBXO30Q8TB52 745 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 SYTL5Q8TDW5 730 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CYB5D2Q8WUJ1 264 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ZFAND2BQ8WV99 257 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 OTULINQ96BN8 352 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 EBNA1BP2Q99848 306 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 B3GNT5Q9BYG0 378 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 PLEKHA5Q9HAU0 1116 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 AGO4Q9HCK5 861 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 C6orf203Q9P0P8 240 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CPA4Q9UI42 421 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ADAMTS6Q9UKP5 1117 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CRYL1Q9Y2S2 319 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CAB39Q9Y376 341 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 A0A1W2PPW3 197 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 HNRNPCL2B2RXH8 293 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TFECO14948 347 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TIMM44O43615 452 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 HS6ST1O60243 411 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CBFA2T3O75081 653 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ZNF682O95780 498 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 C2P06681 752 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 DLDP09622 509 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CCNA2P20248 432 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ACO1P21399 889 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 POU1F1P28069 291 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CDKN2BP42772 138 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 RBP5P82980 135 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 LRRC74AQ0VAA2 488 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ITGA7Q13683 1181 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 MYBPC2Q14324 1141 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ZACNQ401N2 412 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ARL13AQ5H913 290 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ZC3H12BQ5HYM0 836 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ZNF470Q6ECI4 717 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TWF2Q6IBS0 349 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 PRR23BQ6ZRT6 265 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CAMK1DQ8IU85 385 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 MAP4K3Q8IVH8 894 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 DCBLD1Q8N8Z6 715 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 RDM1Q8NG50 284 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 URGCPQ8TCY9 931 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 NANOS1Q8WY41 292 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 SLC39A13Q96H72 371 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 C1orf159Q96HA4 380 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TMEM176AQ96HP8 235 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CPB2Q96IY4 423 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 VCPIP1Q96JH7 1222 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CGRRF1Q99675 332 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 FRMD8Q9BZ67 464 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 GP6Q9HCN6 339 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 CASS4Q9NQ75 786 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 AASDHPPTQ9NRN7 309 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 SNX15Q9NRS6 342 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 SNX8Q9Y5X2 465 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 PTPRJQ12913 1337 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TRIP12Q14669 1992 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TCRBV16S1A1N1A0A5B0 115 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 KRBA1A5PL33 1030 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ASNA1O43681 348 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 DBTP11182 482 aaKnown RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TFEBP19484 476 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 FUT4P22083 530 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 ALAS2P22557 587 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 MMP8P22894 467 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 HOXC8P31273 242 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 KPNA1P52294 538 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 EFNA5P52803 228 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TPTEP56180 551 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 GTF2BQ00403 316 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 KLF1Q13351 362 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 PRKD1Q15139 912 aaPredicted RBP5.48□□□□□ -1.53
LIMA1-203ENST00000547825 DEPDC1Q5TB30 811 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 PIK3R6Q5UE93 754 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 SLC6A19Q695T7 634 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 OR52E8Q6IFG1 317 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 EFCAB12Q6NXP0 572 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 TAF2Q6P1X5 1199 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 B3GNT9Q6UX72 402 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 PACS1Q6VY07 963 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 SLC41A1Q8IVJ1 513 aa5.48□□□□□ -1.53
LIMA1-203ENST00000547825 C4orf19Q8IY42 314 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms