RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 METTL2AQ96IZ6 378 aaKnown RBP4□□□□□ -1.77
CCDC38-204ENST00000546816 SLC41A2Q96JW4 573 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 DDX43Q9NXZ2 648 aaKnown RBP4□□□□□ -1.77
CCDC38-204ENST00000546816 TTC7AQ9ULT0 858 aaPredicted RBP4□□□□□ -1.77
CCDC38-204ENST00000546816 A4GNTQ9UNA3 340 aa4□□□□□ -1.77
CCDC38-204ENST00000546816 BAG4O95429 457 aaKnown RBP3.99□□□□□ -1.77
CCDC38-204ENST00000546816 COX7A2P14406 83 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 NR0B1P51843 470 aaKnown RBP3.99□□□□□ -1.77
CCDC38-204ENST00000546816 ISL1P61371 349 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 SORDQ00796 357 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 NAE1Q13564 534 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 SLC9B1Q4ZJI4 515 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 ZNF772Q68DY9 489 aaPredicted RBP3.99□□□□□ -1.77
CCDC38-204ENST00000546816 ZNF852Q6ZMS4 543 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 ASB18Q6ZVZ8 466 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 HAPLN4Q86UW8 402 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 NOC3LQ8WTT2 800 aaKnown RBP3.99□□□□□ -1.77
CCDC38-204ENST00000546816 MAELQ96JY0 434 aaKnown RBP3.99□□□□□ -1.77
CCDC38-204ENST00000546816 KLHL15Q96M94 604 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 MPHOSPH8Q99549 860 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 MTERF1Q99551 399 aaKnown RBP3.99□□□□□ -1.77
CCDC38-204ENST00000546816 H2AFJQ9BTM1 129 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 LRRC1Q9BTT6 524 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 GPR63Q9BZJ6 419 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 OR2W1Q9Y3N9 320 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 LOXL2Q9Y4K0 774 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 SCINQ9Y6U3 715 aa3.99□□□□□ -1.77
CCDC38-204ENST00000546816 IGKV3D-15A0A087WSY6 115 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 TEX13CA0A0J9YWL9 993 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 A0A1W2PQM1 296 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 CTAGE9A4FU28 777 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 CTAGE8P0CG41 777 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 IRF1P10914 325 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 CAMK1Q14012 370 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 TMEM30BQ3MIR4 351 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 GGNBP1Q5YKI7 109 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 ZNF280DQ6N043 979 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 CTAGE4Q8IX94 777 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 TAS1R2Q8TE23 839 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 RHBDF1Q96CC6 855 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 SYT17Q9BSW7 474 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 PPCSQ9HAB8 311 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 HCFC1R1Q9NWW0 138 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 CEPT1Q9Y6K0 416 aa3.98□□□□□ -1.77
CCDC38-204ENST00000546816 TNPO2O14787 897 aaKnown RBP3.97□□□□□ -1.77
CCDC38-204ENST00000546816 LDLRAD4O15165 306 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 ZNF500O60304 480 aaPredicted RBP3.97□□□□□ -1.77
CCDC38-204ENST00000546816 PEX14O75381 377 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 NR1D1P20393 614 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 CNTFP26441 200 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 GGT5P36269 586 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 GNL1P36915 607 aaPredicted RBP3.97□□□□□ -1.77
CCDC38-204ENST00000546816 GABRB2P47870 512 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 PMP22Q01453 160 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 GTF2H2Q13888 395 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 GTF2H2CQ6P1K8 395 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 DUS1LQ6P1R4 473 aaKnown RBP3.97□□□□□ -1.77
CCDC38-204ENST00000546816 KCTD8Q6ZWB6 473 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 RRM2BQ7LG56 351 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 ANKRD18AQ8IVF6 992 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 BEST3Q8N1M1 668 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 PCDH20Q8N6Y1 951 aaKnown RBP3.97□□□□□ -1.77
CCDC38-204ENST00000546816 KLHDC9Q8NEP7 349 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 TRIM63Q969Q1 353 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 ANKRD9Q96BM1 317 aaPredicted RBP3.97□□□□□ -1.77
CCDC38-204ENST00000546816 APOPT1Q96IL0 206 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 ZNF583Q96ND8 569 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 ERVK-11Q9UQG0 969 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 DLGAP4Q9Y2H0 992 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 SMAD5-AS1Q9Y6J3 95 aa3.97□□□□□ -1.77
CCDC38-204ENST00000546816 IFRD1O00458 451 aaPredicted RBP3.96□□□□□ -1.78
CCDC38-204ENST00000546816 EXTL3O43909 919 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 WDR1O75083 606 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 IFIT1P09914 478 aaKnown RBP3.96□□□□□ -1.78
CCDC38-204ENST00000546816 PAX1P15863 534 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 NOVP48745 357 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 GNAQP50148 359 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 TLE2Q04725 743 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 SREBF2Q12772 1141 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 CCDC96Q2M329 555 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 PRICKLE4Q2TBC4 344 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 PDSS1Q5T2R2 415 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 NAA35Q5VZE5 725 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 ARHGAP17Q68EM7 881 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 BRAT1Q6PJG6 821 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 CYP26C1Q6V0L0 522 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 ANKRD42Q8N9B4 389 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 OR5R1Q8NH85 324 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 FAM76AQ8TAV0 307 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 HMGCLL1Q8TB92 370 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 GRAPLQ8TC17 118 aaPredicted RBP3.96□□□□□ -1.78
CCDC38-204ENST00000546816 PIGTQ969N2 578 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 GCC1Q96CN9 775 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 GRAMD2BQ96HH9 432 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 PPP1R13BQ96KQ4 1090 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 UBXN10Q96LJ8 280 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 F2RL3Q96RI0 385 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 FKRPQ9H9S5 495 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 PPP1R14DQ9NXH3 145 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms