RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SEMA5AQ13591 1074 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 CPZQ66K79 652 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 DPY19L2P1Q6NXN4 242 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 C6orf15Q6UXA7 325 aaPredicted RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 SRLQ86TD4 932 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 CBARPQ8N350 705 aaPredicted RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 SFRP1Q8N474 314 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 Q8NA96 180 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 TSEN2Q8NCE0 465 aaKnown RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 PRR7Q8TB68 274 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 FNIP1Q8TF40 1166 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 PDCD6IPQ8WUM4 868 aaKnown RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 CPA5Q8WXQ8 436 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 CENPIQ92674 756 aaPredicted RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 NTAN1Q96AB6 310 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 SCARF2Q96GP6 870 aaPredicted RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 OR2M4Q96R27 311 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 ULBP3Q9BZM4 244 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 TWSG1Q9GZX9 223 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 PDCL3Q9H2J4 239 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 ATP13A3Q9H7F0 1226 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 LUZP4Q9P127 313 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 TMEM98Q9Y2Y6 226 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 PCYT1BQ9Y5K3 369 aaPredicted RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 ADGRG4Q8IZF6 3080 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 MTORP42345 2549 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 BICDL2A1A5D9 508 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 PIPSLA2A3N6 862 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 C2CD4BA6NLJ0 364 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 WASH4PA8MWX3 477 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 PRAMEF11O60813 436 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 CREG1O75629 220 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 TNFAIP3P21580 790 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 ERCC5P28715 1186 aaPredicted RBP9.34□□□□□ -0.91
CHD4-212ENST00000545083 SDC4P31431 198 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 PPP1R2P41236 205 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 MAPK9P45984 424 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 CSNK1DP48730 415 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 NOMO3P69849 1222 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 BCL2L1Q07817 233 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 FOXM1Q08050 763 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 PTPRRQ15256 657 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 PARP15Q460N3 678 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 NAA35Q5VZE5 725 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 DENND2CQ68D51 928 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 STRADAQ7RTN6 431 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 HSD11B1LQ7Z5J1 315 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 NOP9Q86U38 636 aaKnown RBP9.34□□□□□ -0.91
CHD4-212ENST00000545083 TRIM74Q86UV6 250 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 HSCBQ8IWL3 235 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 UMODL1-AS1Q8N2C9 162 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 FAM172AQ8WUF8 416 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
CHD4-212ENST00000545083 DTD2Q96FN9 168 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 RUFY1Q96T51 708 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 LRRC19Q9H756 370 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 MLXIPLQ9NP71 852 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 DONSONQ9NYP3 566 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 KCND3Q9UK17 655 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 CELSR1Q9NYQ6 3014 aa9.34□□□□□ -0.91
CHD4-212ENST00000545083 NF1P21359 2839 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 A0A0U1RQS6 177 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 TTC24A2A3L6 582 aaPredicted RBP9.33□□□□□ -0.92
CHD4-212ENST00000545083 GTPBP10A4D1E9 387 aaKnown RBP9.33□□□□□ -0.92
CHD4-212ENST00000545083 GOLGA6CA6NDK9 693 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 GOLGA6BA6NDN3 693 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 BIN1O00499 593 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 CREB3O43889 395 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 KIAA0754O94854 1291 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 HEXIM1O94992 359 aaKnown RBP9.33□□□□□ -0.92
CHD4-212ENST00000545083 SOD1P00441 154 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 MMEP08473 750 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 GOLGA6DP0CG33 693 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 PRF1P14222 555 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 LHCGRP22888 699 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 GRNP28799 593 aaKnown RBP9.33□□□□□ -0.92
CHD4-212ENST00000545083 PTPN9P43378 593 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 PGDP52209 483 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 GFERP55789 205 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 BPIFB4P59827 614 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 SH3BP2P78314 561 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 HHEXQ03014 270 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 PAK1Q13153 545 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 DNASE1L3Q13609 305 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 PYCR3Q53H96 274 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 RAET1GQ6H3X3 334 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 RFLNAQ6ZTI6 216 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 Q6ZVL8 140 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 MARK2Q7KZI7 788 aaKnown RBP9.33□□□□□ -0.92
CHD4-212ENST00000545083 PAF1Q8N7H5 531 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 CT55Q8WUE5 264 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 CELF6Q96J87 481 aaKnown RBP9.33□□□□□ -0.92
CHD4-212ENST00000545083 SLC25A23Q9BV35 468 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 TBC1D10AQ9BXI6 508 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 SARS2Q9NP81 518 aaKnown RBP9.33□□□□□ -0.92
CHD4-212ENST00000545083 GOLGA6AQ9NYA3 693 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 PCDHGA6Q9Y5G7 932 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 HIVEP1P15822 2718 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 CSMD2Q7Z408 3487 aa9.33□□□□□ -0.92
CHD4-212ENST00000545083 PDZD2O15018 2839 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms